Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01159 ATGGCTGAGAATTCAGCAAGAATTGAAAACCATGAGGTAGTTTTAGATGTAAACAAGGATGCCTCCAAAACATGTGAAGGTTCAGGCACCTGTGTGCCTTTCTTGCAGAAGTTGGTAGCTGAGGTGGTGGGCACATATTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACAAGGACCATGACAATGTGGTGACACTTCCTGGGATCTCAATTGTTTGGGGACTGGTTGTGTTGGTCAATGTTTACTCTGTTGGTCACATCTCTGGTGCCCATTTCAACCCTGCTGTCACTATTGCTTTTGCTACCACCAGAAGGTTTCCATGGATGCAGGTACCAGCTTACATATTAGCTCAGCTACTAGGAGCCACACTTGCAAGTGGAACTCTGAAATTAATATTTAGTGGGAGTCATGACCAGTTTTCAGGAACACTTCCAGCTGGATCTAACCTACAAGCTTTTGTGGTTGAATTCATAATCACTTTTTACCTTATGTTTGTCATATCCGGGGTTGCCACTGATAACAGAGCGATTGGTGAGTTGGCTGGTCTTGCAATTGGGTCTACAATACTGCTGAATGTGATGATTGCAGGGCCTGTGACAGGAGCATCAATGAACCCAGTTAGAAGCTTAGGACCTGCATTTGTACACAGTGAATACAGAGGAATATGGATATACTTGGTGTCACCGGTTCTGGGGGCGGTGGCCGGAGCATGGGTCTACAACGTCGTCAGGTTCACTGATAAACCATTGCGTGAGATCACCAAGAGTGCCTCTTTCCTCAAAGGAAATAATTAA 801 0.4519 MAENSARIENHEVVLDVNKDASKTCEGSGTCVPFLQKLVAEVVGTYFLIFAGCASVVVNKDHDNVVTLPGISIVWGLVVLVNVYSVGHISGAHFNPAVTIAFATTRRFPWMQVPAYILAQLLGATLASGTLKLIFSGSHDQFSGTLPAGSNLQAFVVEFIITFYLMFVISGVATDNRAIGELAGLAIGSTILLNVMIAGPVTGASMNPVRSLGPAFVHSEYRGIWIYLVSPVLGAVAGAWVYNVVRFTDKPLREITKSASFLKGNN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01159 266 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Rops2g01159 266 Pfam Major intrinsic protein 32 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 SUPERFAMILY Aquaporin-like 32 256 IPR023271 -
Rops2g01159 266 Gene3D Glycerol uptake facilitator protein. 2 257 IPR023271 -
Rops2g01159 266 PANTHER AQUAPORIN NIP2-1 22 262 IPR034294 -
Rops2g01159 266 CDD MIP 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops2g01159 266 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01159 Rops-Chr2 16546786 16548711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01159 1 263 Major Intrinsic Protein MIP AT5G37810 56.827 2.74e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01159 K09874 - gmx:100813448 426.402