Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01155 ATGCTGCTATCTAGGACCTTCTTTGCTTTCTTAATCATAGCATTGAGTTATTGTTTCACATGGCTTGAATATGCTGAATCCAAACTACCCCAGGAAGAGGTTAATGCTCTTGAAGAAATCACTAGAACGATGGGTGCCACCTATTGGAAGTTTGATAGTGATTCTTGTCAAATTGAAATGGTTGGGTTAACACCAAAGCGACCTGATGGATCTCAAAGCAGCATTGATTGTGATTGCTCTTCTGAAAAAGACACCTTCTGTCATGTAGTAAGGATTATGTTCAAGGGGTACAACCTTCCTGGCATGCTTCCTCCTGAAATGGTTAAGCTTCCTTACCTCAGAGAAATTGATTTAGCATTAAATTACCTAAATGGTACGATCCCAAAGGAATGGGCTTCAATGAAACTAACTTCAATCTCTCTATTTGTTAATCGTTTATCAGGGGAAATTCCTAAGGAGTTGGGAAATATTACCACTCTAACATACCTGAACCTTGAAGCAAACCAATTTTCTGGTCTTGTTCCCTCTGAACTTGGAAGTCTATTTGACCTGCAAACTTTGATTTTATCATCCAATAAATTGTCTGGGAACTTACCTGTGACATTTGCTCAGTTACAGAATTTGACAGATTTTAGGATAAATGATAACAGTTTCAAAGGAAAAATACCTAGCTTCATACAGAATTGGAAACAACTTCAAAGACTAGAAATGCTTGGAAGTGGACTGGAGGGACCTATCCCATCAAATATATCTCTTTTGAGTAATTTATCTCAACTGAGGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCTATTTTAAGCAATATGACGGGAATGATAAGATTGATTTTGAGAAATTGTAATATTACCGGCGAGCTTCCTAGCTACTTCTGGACAATGAAGAGTTTGGAAATGTTGGATCTCAGCTTCAATAATTTGGTTGGGGAAATACCCGTGACCGTGATGGTACATGTGGGGCATTTGAGATTTCTCTTCCTAACTGGCAACATGCTAAGTGGTAATGTACCAGACTCTGTCTTGATGGATGGAAGCAATGTTGATCTTTCTTACAACAACTTTACGTGGCAAGGAGCTGAGCAATCTGCTTGTGGAGATTACCTGAATTTAAACCTAAACTTGTTCCGAAGCTCTGTAGGGACAAATGCATTACAGGGGATTCTTCCATGTTTAAAAACTTTCAACTGTCCTAGATATTCAAGTTGTTTGCATGTTAATTGTGGTGGAAAGGATATAAAGGTGACGGAAAATGATGAAGATGTCCTCTATGTAGGAGATGGAGATGTGGTAGGTGGTGCTGCTAAATATTTTAATGATTATAAAAATTACTGGGGGTTTAGTAGCACTGGGGACTTCCTGGATGATGGTGATTACCAAAATACACGTTACACCAGGTCTTTGTCATCTTCAAGCATGCCTGAATTATATACAACGGCTCGTGTCTCTCCGATTTCACTTACTTATTTTCACTATTGCTTGGAAAATGGGAAATATACTGTAAATCTCCACTTTGCAGAAATACAATTTACAAATGATAACACATATAAAAGTCTTGGGAAGCGCGTATTTGATATCTATGTTCAGGAAAGATTAGTTTGGAAGGATTTTAATATTGAAGATGAAACACATGTTGCTCAAAAACTACGTATAATATCAATATATAATGTCACTGTAACAGACAATATTCTGGAGATTCGATTCTACTGGGCTGGCAAGGGGACTACAAGGATTCCTGTTGCTGGAGTTTATGGTCCCCTCATTTCAGCTTTCTCTGTTGTTTCTGATTCTAAACCTTGTTCAGACCGAACAAACGGAAGGCGTAAAATAATCGTTGGAGTTGGATTTGGGGTTGGAGCTCTATGCCTAGTCATTATTGTAGTGGGAATCTGTTGGTGGAAAGGCTACATCAAAGGAATAATTAGAAGAGAAAAAGGTATTGAAGGGCAAGAGTCTCATATGAGGACATTTACATTAAAACAAATTAGCACTGCCACAGATGACTTCAGTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGATGGTACATGGGTAGCAGTCAAACAGCTATCATCAAAGTCCCGGCAGGGAAACCGTGAATTTTTAAATGAGATAGGCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCACGGATGTTGCATTGAAGGGGATCAATTAATGTTGGTGTATGAATACATGGAAAATAATAGCCTGGCCCGTGCTTTATTCAGCTTAGAAAATCGGCTTGAACTTGATTGGCCAACAAGGCTTAGGATCATTATTGGCATAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCAAGAATCAAGATTGTTCATCGAGATATCAAAGCTACTAATGTGTTGCTGGATAGGAATTTAAACCCTAAAATATCTGATTTTGGGTTGGCTAAACTTGATGAAGAGGAGAAGACCCATATCATCACCAGAGTGGCTGGGACAATAGGATATATGGCCCCGGAATATGCATTATGGGGTTACCTGACTTACAAGGCTGATGTTTACAGTTTTGGAGTGGTGGTCTTGGAAATTGTTAGTGGGAAGAACAATAACAGTTACATGCCAAGTGATAATTGTGTTTGCCTTTTAGATAGGGCATGCCATTTGCAACGTACTGAAAACTTGAAGAAACTGGTTGATGGAAGGTTGGGATCAGAGGTGAACCCAACTGAAGCAATAAATGTGGTGAGAGTAGCTCTCCTGTGCACAAATGCATCACCTTCACTTAGGCCAACAATGTCTGAGGTTGTAAACATGCTTGAAGGAAGAATGAACATTCCAGATGCTATCCCAGAATCAAGTGTTTCCAGTGAAGATTTAAGGTTTAAAGCCATGAGGGACATCCATCAACACAGGGAAGGTCAGAGTTTGAGCACAAGTGGAACAGACAATTCAACAGGACTCCTTACACGTAGTTCTCCCTCAGTATTTGGCAATGACATACGTGAGATATCCACAGAATCATGA 3042 0.3922 MLLSRTFFAFLIIALSYCFTWLEYAESKLPQEEVNALEEITRTMGATYWKFDSDSCQIEMVGLTPKRPDGSQSSIDCDCSSEKDTFCHVVRIMFKGYNLPGMLPPEMVKLPYLREIDLALNYLNGTIPKEWASMKLTSISLFVNRLSGEIPKELGNITTLTYLNLEANQFSGLVPSELGSLFDLQTLILSSNKLSGNLPVTFAQLQNLTDFRINDNSFKGKIPSFIQNWKQLQRLEMLGSGLEGPIPSNISLLSNLSQLRISDINGPSQDFPILSNMTGMIRLILRNCNITGELPSYFWTMKSLEMLDLSFNNLVGEIPVTVMVHVGHLRFLFLTGNMLSGNVPDSVLMDGSNVDLSYNNFTWQGAEQSACGDYLNLNLNLFRSSVGTNALQGILPCLKTFNCPRYSSCLHVNCGGKDIKVTENDEDVLYVGDGDVVGGAAKYFNDYKNYWGFSSTGDFLDDGDYQNTRYTRSLSSSSMPELYTTARVSPISLTYFHYCLENGKYTVNLHFAEIQFTNDNTYKSLGKRVFDIYVQERLVWKDFNIEDETHVAQKLRIISIYNVTVTDNILEIRFYWAGKGTTRIPVAGVYGPLISAFSVVSDSKPCSDRTNGRRKIIVGVGFGVGALCLVIIVVGICWWKGYIKGIIRREKGIEGQESHMRTFTLKQISTATDDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLMLVYEYMENNSLARALFSLENRLELDWPTRLRIIIGIAKGLAFLHEESRIKIVHRDIKATNVLLDRNLNPKISDFGLAKLDEEEKTHIITRVAGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIVSGKNNNSYMPSDNCVCLLDRACHLQRTENLKKLVDGRLGSEVNPTEAINVVRVALLCTNASPSLRPTMSEVVNMLEGRMNIPDAIPESSVSSEDLRFKAMRDIHQHREGQSLSTSGTDNSTGLLTRSSPSVFGNDIREISTES* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01155 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 199 265 - -
Rops2g01155 1013 Gene3D - 407 604 - -
Rops2g01155 1013 SMART serkin_6 675 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01155 1013 ProSiteProfiles Protein kinase domain profile. 675 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01155 1013 Pfam Malectin domain 409 597 IPR021720 -
Rops2g01155 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 980 - -
Rops2g01155 1013 Gene3D Phosphorylase Kinase; domain 1 645 750 - -
Rops2g01155 1013 SUPERFAMILY Protein kinase-like (PK-like) 657 948 IPR011009 -
Rops2g01155 1013 SUPERFAMILY L domain-like 75 345 - -
Rops2g01155 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Rops2g01155 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 407 602 - -
Rops2g01155 1013 MobiDBLite consensus disorder prediction 975 1013 - -
Rops2g01155 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 645 750 - -
Rops2g01155 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 267 390 - -
Rops2g01155 1013 MobiDBLite consensus disorder prediction 979 1013 - -
Rops2g01155 1013 Gene3D Transferase(Phosphotransferase) domain 1 751 958 - -
Rops2g01155 1013 Pfam Protein tyrosine and serine/threonine kinase 679 945 IPR001245 GO:0004672|GO:0006468
Rops2g01155 1013 Gene3D Ribonuclease Inhibitor 269 371 IPR032675 -
Rops2g01155 1013 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
Rops2g01155 1013 Gene3D Ribonuclease Inhibitor 198 268 IPR032675 -
Rops2g01155 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 35 198 - -
Rops2g01155 1013 CDD STKc_IRAK 681 947 - -
Rops2g01155 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 751 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01155 Rops-Chr2 16468805 16482273 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01155 8 840 Receptor kinase-like Gene Family AT1G29750 61.391 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01155 PK_Tyr_Ser-Thr 9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01155 - - mtr:11406167 1670.6