Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01145 ATGAGTGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCGGACTGTAACATATATGCACTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGTTGAAGGGAAAGGATAATATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTATTTGAAGAAGTTACGAAAGGCTCTTTCAGTAATAAGGATGGCCAAGTCAAGGATGATGGATTTATATACATGGTACTTGAATGTGGGGAAATTGATTTAGCTCACATGTTGTCCCAGAAGTGGAAGGAACTGGATGGACACAACCGGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACCATTCATGAGGAACGTATTGTGCACTCTGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATCTTGGTATAGCCAAAGCAATAATGAGTGATACAACTAACATCCAACGGGAATCACAGGTAGGTACTCTGAGTTACATGTCTCCTGAGGCATTCATGTGTAATGAGACTGATGCGAACGGAAACATCATAAAGTGTGGTCGGCCATCAGGTATCTGGTCCCTAGGCTGCATCCTTTATCAAATGGTCTACGGGAGAACACCTTTTGCTGAGTACAAGACGTTTTGGTCCAAATTCAAAGTTATAACAGATCCAAATCATGAAATTATGTATGAACCAGTTTCAAACCCATGGCTAATGGATCTTATGAAGAGATGTTTTGAAGACCCTTCCCACATAAACAACATGAGTTGCATGTGCTGTGTGAAGACATCAACCCACCCAAACAGCTTGCATGGGAGTTCCACGTGA 900 0.4122 MSGSGGSSEVHKVISSDCNIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALFEEVTKGSFSNKDGQVKDDGFIYMVLECGEIDLAHMLSQKWKELDGHNRTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDLGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNIIKCGRPSGIWSLGCILYQMVYGRTPFAEYKTFWSKFKVITDPNHEIMYEPVSNPWLMDLMKRCFEDPSHINNMSCMCCVKTSTHPNSLHGSST* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01145 299 ProSiteProfiles Protein kinase domain profile. 1 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01145 299 SMART serkin_6 3 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01145 299 Gene3D Transferase(Phosphotransferase) domain 1 110 285 - -
Rops2g01145 299 FunFam serine/threonine-protein kinase mph1 isoform X1 110 280 - -
Rops2g01145 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Rops2g01145 299 Gene3D Phosphorylase Kinase; domain 1 1 75 - -
Rops2g01145 299 Pfam Protein kinase domain 3 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01145 299 CDD PKc_Mps1 3 273 IPR027084 -
Rops2g01145 299 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Rops2g01145 299 PANTHER MIXED LINEAGE PROTEIN KINASE 3 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01145 Rops-Chr2 16333920 16334819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01145 3 244 MAP Kinase Kinase Kinase AT4G08470 27.984 5.21e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Rops2g01145 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01145 K08866 - gmx:100788990 516.538