Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01134 ATGCCAGGGAACAATTATAACTGCACCCCTTTAACACCAAGATCAAGATTGGAAAGGCTTTTGAGGGAAAGAGAGTTAAGGAAATCCTTCAGGCATATTCAACCAACCGAAGAGGCAAGAGATGGCAACAAAGAGGCAGAACAATGTTGTAGTGATTCATGTATAAGTGAGAATGAAATTTCTTGTATGCATAATGAGGAAGAGGTCACGGAAATGGTTGCAGATGCAAGAAGTCAAAGGCAAGATGAGAGGCAATGCAAACAACGTTTGTTAGTGGTAGCTAACAGGTTGCCTGTTTCTGCTGTTAGAGAGAGTGTGGACTCATATCACCTTGAGATCAGTGTAGGAGGGCTTGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGACACTAGATGGATTGGGTGGGCTGGTGTGAATGTGGCTGATGATGTTGGCCAGAAAGCATTAACTAAAGCTTTAGCTGAAATGAGATGCATACCAGTATTTCTTGATGACGAGATAGTAAATCAGTACTATAATGGCTACTGCAACAACATATTGTGGCCTCTATTTCATTACCTTGGGCTTCCACAAGAAGATAGACTTGCCACCACACGTAGTTTTCAATCTCAATTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTAGTAAATAAGCATTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTCCTTCCAAAATGTTTGAAAGAGTACAATGACAAAATGAAAGTTGGGTGGTTTCTCCATACACCTTTTCCTTCCTCAGAAATACATAGGACTCTGCCATCAAGATCGGAGTTGTTGAGATCTGTACTTGCCGCTGATTTGGTGGGATTCCATACTTACGATTATGCAAGGCATTTTGTTAGTGCTTGCACTCGTATTCTTGGTCTTGAAGGTACACCCGAAGGAGTAGAAGATCAAGGGAAACTAACCCGTGTGGCTGCGTTTCCTATTGGGATTGACTCTGAGAGATTTATTCGAGCTCTTGAGCTCCCAGAAGTCCAGGCTCACATGAAAGAACTGAAGGAAAGATTTGCAGGCCGAAAGGTAATGTTAGGTGTTGATCGTCTAGATATGATAAAAGGAATACCCCAGAAACTCTTGGCATTTGAAAAGTTCCTCGAGGAGAATTCACATTGGCATGATGAAGTTGTCTTGCTGCAAATTGCTGTACCTACTAGGACAGATGTTCCTGAATATCAAAAGCTTACGAGCCAGGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGAACACTTACTGCTGTCCCAATACACCATCTGGATCGGTCACTTGACTTTCATGGATTATGTGCACTCTATGCTGTTACTGATGTAGCACTTGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGTCAAGCTTCCAAGAAGGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCTGTCTTGGTAAATCCATGGAACATCACAGAGGTTGCTGCTTCTATCGGTTATGCTTTGGATATGCCAGCTGATGAAAGAGAAAAACGACATCAGTTTAATTTTAAGCACGTGACAACCCACACATCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTGGAAGCTCAGCTTAGGACAAGACAAGTTCCTCCATTACTTCCCAATGAAGTGGCAGTTGATTGTTACTCAAAATCCAATAATCGATTAATTATACTGGGTTTCAATGCCACTTTGACTGAACCAGTGGATGCCCTTGGAATGGGGGGTCAAATTAGAGAGATGGAACTTAAATTGCACCCAAATCTGAAGGAAACTTTAAAGAAGTTATCTGAGGATCCAAAGACAACAATAGTTGTTCTGAGTGGGAGTGATAGAGCTGTCCTTGACAAAAACTTCAGTGAATACAATATGTGGTTGGCAGCAGAAAATGGGATGTTTTTGAGGCTTACTTCAAGTGAATGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGTGTAAAGCATGTTTTTGAGTATTTTACTGAAAGAACCCCACGGTCTCATTTTGAGGTACGTGAGACTTCAGTTGTGTGGAATTACAAGTATGCAGATGTTGAATTTGGAAGGATTCAAGCAAGAGATCTGCTTCAACATCTATGGACAGGGCCCATATCAAATGCATCTCTTGATGTTGTCCAAGGAGGAAAATCAGTTGAGGTCAGAGCAGTTGGTGTATCAAAGGGAGCAGCTATTGATCGTATTCTCGGAGAGATAGTTCATAACAAAGGCATGAAGGCACCAATTGATTACGTCCTATGCATTGGTCACTTTCTACCAAAGGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTCCCTTCTGAATCATCTTCAATAGCAAGAGCTATGCTATCCAATTCTTACAGACCATCATCATCTCTGCCAAGATTTTCAGCCAGGAAAAGTGGGTCTAGAGCATCTCGCTGTAAGAAGCAACGTTCATTGTCAAACATAGAAAACAGAGAAATTGATCGTGTGAGTAGTGATCCTTGGACACCAGCATATCGTGATAGAATATCAGCACATGAGGGTTCTTCAGTGCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTGGACGAAAGAGATCAAGTGCTCGCTACCTTCTTAAAACCTCACATGATGTGGTCAATCTGTTAAGTGACCTGGCGGATCATTCTTCATCACCATCAACTTGA 2787 0.4148 MPGNNYNCTPLTPRSRLERLLRERELRKSFRHIQPTEEARDGNKEAEQCCSDSCISENEISCMHNEEEVTEMVADARSQRQDERQCKQRLLVVANRLPVSAVRESVDSYHLEISVGGLVSALLGVKEFDTRWIGWAGVNVADDVGQKALTKALAEMRCIPVFLDDEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALELPEVQAHMKELKERFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSHWHDEVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHGLCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNEVAVDCYSKSNNRLIILGFNATLTEPVDALGMGGQIREMELKLHPNLKETLKKLSEDPKTTIVVLSGSDRAVLDKNFSEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSVVWNYKYADVEFGRIQARDLLQHLWTGPISNASLDVVQGGKSVEVRAVGVSKGAAIDRILGEIVHNKGMKAPIDYVLCIGHFLPKDEDVYKFFEPELPSESSSIARAMLSNSYRPSSSLPRFSARKSGSRASRCKKQRSLSNIENREIDRVSSDPWTPAYRDRISAHEGSSVLDLKGDNYFSCAVGRKRSSARYLLKTSHDVVNLLSDLADHSSSPST* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01134 928 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 335 - -
Rops2g01134 928 Pfam Trehalose-phosphatase 611 821 IPR003337 GO:0003824|GO:0005992
Rops2g01134 928 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 557 - -
Rops2g01134 928 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 678 758 - -
Rops2g01134 928 Gene3D Glycogen Phosphorylase B; 80 335 - -
Rops2g01134 928 CDD HAD_TPP 587 806 - -
Rops2g01134 928 SUPERFAMILY HAD-like 586 916 IPR036412 -
Rops2g01134 928 Gene3D - 678 758 - -
Rops2g01134 928 Gene3D - 612 772 IPR023214 -
Rops2g01134 928 CDD GT20_TPS 89 554 IPR001830 GO:0003824|GO:0005992
Rops2g01134 928 FunFam Alpha,alpha-trehalose-phosphate synthase 612 682 - -
Rops2g01134 928 Pfam Glycosyltransferase family 20 89 554 IPR001830 GO:0003824|GO:0005992
Rops2g01134 928 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 554 IPR012766 GO:0003825|GO:0005992
Rops2g01134 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 77 920 IPR001830 GO:0003824|GO:0005992
Rops2g01134 928 MobiDBLite consensus disorder prediction 823 846 - -
Rops2g01134 928 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 336 538 - -
Rops2g01134 928 Gene3D Glycogen Phosphorylase B; 336 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01134 Rops-Chr2 16105386 16113791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01134 1 926 Trehalose Biosynthesis Gene Families AT1G78580 74.973 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01134 K16055 - gmx:100816642 1622.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01134 2 16105386 16113791 Rops2g01134 2 16105386 16113791 ECH