Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01131 ATGGCAACTTCTGACGAGAGTCTTCAACTGTTAACTAACTCATTCTGCATAGCACGCATTGTGCGTGCTCTTCTTTCTTACTGGGTGACCATGCCTCGTAAAGTGAACTATGGACTCGATTACGACGATAATGACTATGTCGACGACTATTATGGCGACTATGATTACGATGTTGACATTGAAGAAGACTGTGAAGGACCTGATACAAAGCAAGAGACCACTAGGCCCGGGCTTTGGCGATGCTCCATTTGCACTTATGACAATGATGAGAGTATGACTTCGTGCGATATTTGTGGTGTTGTACGCCATCCCTTGAATAACATTGGAACTTCCAACAGTAACAAAACAGTTGAAGACATAAGCAAAACTCCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTTCAATCATTTCCACAACCGATTCCCAAAGAAGTTATATTATTTCCAAAGCAGGGTGATGGTTTTCAGACAGATGGCAGTAACTTCTGCAAGCTTGAGAATGTCCAAGGAGAATTTCATGAAATTCATAAAGCTTTTAATAGTCAAAGCCATCCCTATTTAAACATAGATCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTATACCGGCATACATTCTTCCAAAATGGATTTGAAAGACAAAGTTACAAACTCCAAAACTTCTCGGCTCTCATCAAGCATCAGGGAGAAGAATGACCTTTCTGTAAAATCAAATGTTGAAAGTTTGGATAACTTGTCGTCCTTAATGCGAAAGAGCAGGCAGGGTAGTTCAGCTGAGAACAAGATTTCAAAAAATGTAGAAATTGATTCAGAAACAAATGGTAAAACTTCAAACAGCTCACCAGCATCTTTGCTGACAAAGGACAAAGGTGACAATATGAATAAAATAAATTCTTCCAAAAGTGGTACAATTGATATTCAATCAAGCAAAGAGAAGTCAGGTGGTTTATCTGCACTGCCGATAGTCAAAGACAGTGATAAGATTAGTTGCTTTTCTACCAAAGATGGAAAACCTGAAAGTGTTACCAGCAGTTTTAACAACATGGATGTTAATGAAAGATCTGGAAATTCTGATAATACCAATGCTAAGGGACCTCGTCCACAAGTTTCTTATGAGCCAGAAAAATGGATGCTCCCTCAACAGGCTGAAGATACATTGACTCAGCTGAATCTTGCAATTGTTGGCCATGTTGATTCTGGAAAATCAACACTCTCCGGTAGGTTATTACACCTATTGGGACGAATTTCCCAGAAAGAAATGCACAAATTTGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGAGAAAGGGGAATAACTATGACAGTGGCCGTTGCTTATTTTGACACTAAGAAATATCACGTTGTTGTGCTTGACTCCCCCGGCCATAAAGATTTTATCCCAAACATGATTTCTGGGGCAACACAAGCTGATGCGGCAATTCTTGTTATAGATGCCTCACTTGGTTCATTTGAAGCTGGTATGGATGGTAGCAAAGGTCAAACAAGGGAGCATGCTCAACTTATTAGAAGTTTTGGTGTTGAACAGGTTATAGTTGCAGTAAATAAGATGGATGCTGTGGCATTCTCCAAAGATCGATTTGATTTTATAAGACAGCAGCTGAGAACTTTTCTACGCTCATGTGGATTCAAAGATTCTTCTCTATCATGGATTCCCATGAGTGCCATGGAAAATCAAAATTTGGTAGCATCCCCTTCTGATGCTCGTTTCAAAAACTGGTATAGTGGACCTTGTCTGCTAGATGCAATTGACTCACTCCAACCTCCTACTAGAGAATTCTCAAAACCCCTACTAATGCCGATATGTGATGTCATCAAATCAACTACACAAGGACAGGTGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTCATGGGAACAGTACGCTCATTGGAGCGTGACTCTAATGCCTGCACTATTGCAAGTGCTGGAGATAATGTAGCTGTAACGTTGCATGGTGTCGATGGAAGTCATGTAATGGCAGGAGGTGTACTATGCCATCCTGACTTTCCTGTTGCAGTTGCAAAGCATTTGGAATTGAAAGTGCTTGTCTTGGATGGTGCAAATCCCATATTGGTGGGTTCTCAGTTAGAGTTTCATATACACCATGCAAAGGAACCTGCTAGAGTTTCAAGAATATTGTCTGTACTTGATCCAAAGACCGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCACTGCAAAGCAAAGTGCAGTAATTGAGGTGATTTTGCATGAGCCAGTCTGTGTGGTAGAGTCCTCTAGATGTAAAGCTCTTGGAAGGGTGTTTCTCAGATCATCAGGAAGAACAATTTCTGTTGGACTTGTGGCAAGAATAATTGAAGAACAAGATTAA 2463 0.4109 MATSDESLQLLTNSFCIARIVRALLSYWVTMPRKVNYGLDYDDNDYVDDYYGDYDYDVDIEEDCEGPDTKQETTRPGLWRCSICTYDNDESMTSCDICGVVRHPLNNIGTSNSNKTVEDISKTPGASKLARSLFQSFPQPIPKEVILFPKQGDGFQTDGSNFCKLENVQGEFHEIHKAFNSQSHPYLNIDPFKFDVPSPDDVVYTGIHSSKMDLKDKVTNSKTSRLSSSIREKNDLSVKSNVESLDNLSSLMRKSRQGSSAENKISKNVEIDSETNGKTSNSSPASLLTKDKGDNMNKINSSKSGTIDIQSSKEKSGGLSALPIVKDSDKISCFSTKDGKPESVTSSFNNMDVNERSGNSDNTNAKGPRPQVSYEPEKWMLPQQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKFEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVEQVIVAVNKMDAVAFSKDRFDFIRQQLRTFLRSCGFKDSSLSWIPMSAMENQNLVASPSDARFKNWYSGPCLLDAIDSLQPPTREFSKPLLMPICDVIKSTTQGQVSACGKLEAGALRSGSKVLVMPSAVMGTVRSLERDSNACTIASAGDNVAVTLHGVDGSHVMAGGVLCHPDFPVAVAKHLELKVLVLDGANPILVGSQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKSPRCLTAKQSAVIEVILHEPVCVVESSRCKALGRVFLRSSGRTISVGLVARIIEEQD* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01131 820 SMART zf_4 77 101 IPR001876 -
Rops2g01131 820 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 712 816 IPR009001 -
Rops2g01131 820 CDD HBS1_C_III 707 815 - -
Rops2g01131 820 CDD EF1_alpha 393 612 - -
Rops2g01131 820 ProSiteProfiles Zinc finger RanBP2 type profile. 75 104 IPR001876 -
Rops2g01131 820 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 389 620 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 SUPERFAMILY Ran binding protein zinc finger-like 76 102 IPR036443 -
Rops2g01131 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 634 IPR027417 -
Rops2g01131 820 MobiDBLite consensus disorder prediction 250 315 - -
Rops2g01131 820 FunFam Elongation factor 1 alpha-like protein 382 613 - -
Rops2g01131 820 MobiDBLite consensus disorder prediction 338 369 - -
Rops2g01131 820 Gene3D Translation factors 710 820 - -
Rops2g01131 820 ProSitePatterns Zinc finger RanBP2-type signature. 79 98 IPR001876 -
Rops2g01131 820 Pfam Elongation factor Tu C-terminal domain 709 815 IPR004160 -
Rops2g01131 820 Gene3D - 70 117 - -
Rops2g01131 820 Pfam Elongation factor Tu GTP binding domain 392 609 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 FunFam elongation factor 1-alpha isoform X4 710 819 - -
Rops2g01131 820 FunFam Translation elongation factor EF-1 616 706 - -
Rops2g01131 820 PANTHER TRANSLATION FACTOR 388 815 - -
Rops2g01131 820 PRINTS GTP-binding elongation factor signature 488 499 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 PRINTS GTP-binding elongation factor signature 472 482 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 PRINTS GTP-binding elongation factor signature 533 542 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 PRINTS GTP-binding elongation factor signature 393 406 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 PRINTS GTP-binding elongation factor signature 452 460 IPR000795 GO:0003924|GO:0005525
Rops2g01131 820 Gene3D - 380 613 IPR027417 -
Rops2g01131 820 Gene3D Translation factors 617 706 - -
Rops2g01131 820 MobiDBLite consensus disorder prediction 333 371 - -
Rops2g01131 820 SUPERFAMILY Translation proteins 611 706 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01131 Rops-Chr2 16066181 16075992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01131 188 818 Eukaryotic Initiation Factors Gene Family AT5G10630 60.821 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01131 K14416 - gmx:100801724 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00873 11 12499618 12502513 Rops2g01131 2 16066181 16075992 PCT