Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01105 ATGGATTCCCGTTTGAGGAAGGTAAGTGGTTCTCTCGTAAGAGGAACAGAGGAGATGTTGTCAGCCAAAGATAAATTTTCATACAAAGAGGAGCTATTGCATTTGGTTCGTACGAGGGATTTTATCAGTCTCTTGTTGAGTTACCCAGTCAAATTAGAAGAGGAAGGTATATTAAAGGCCTGGATTAATGCATTTTCCCAATGGAGAGCCCAATTACTCACGTGGATGTCTACTGATGATCATGATGGTATGACAGACAAACCGTGGCGTGAACTGACTCAGAAGGCACTGAGATGTATGGAAGGGCTTATGCCAAATGAAATGATACTTCAAATAGAACACAGTGGGAGGTTCGACTATCATAATACTGAAATACCAGAAGCCATTCTGGATTTAACTGTTGATCTTGCAATTGAGCAGTTGATTCAAACTTTGTTTTCTAGAGATGATTATGTACGCAATATACGCTATGTCAGGCTGTCAACCAGAGACTTTGCTGAAAAAAGATCTGTGGTGGACAAAATAGCAGCTGCCTTGGAAGACAGGCGCAACTTGTTTGGAAATGATAAAGATTTTCTTAGAGCCCTATGGATAGATGCCTTAATATATCAGAGTGATGTAGAGGTTCGAGTTCAAGAAGAGATCAATGCGATGATGGCAGGAGTAGTTACAGAAGACGATGACATTTTGCGTACAAGAGGTGTTGAGGAAGAGATGGCAAACAACAGACATTTGGTGATTCTAGTGGATGGAGACAGTTACAAAAAGTTGGACCCCAGAAAAGTGCATTTTCCTGTCGGAACTGTGGTGTTGTTGATAACAACTGAACCGTCAGCTCAGACACAAGAGGGTGATGAACTTACATGCATAATGGATTTAAATATCAGGACCCTGGATCATGCGTTGCCTTGGGAAGTCTTCTGCAACCATGCGGGCAGTAGTGTAGTATATGCACCAAGGGCCATTCAGAGAATCGCAGTGCAAATAGTTGGGGAATGTCGTGGCCATCTTCTTGCCATTGTCCTTGTGGCAAAGTCCCTGAGGAATGTGAAAGGTACTAAACAGTGGAAACTTGCACTGGACAAATTAAGCTACACGAATCCTTCCTATGATTACCAAGAGAGTGATCGAATTGGCATTAGCAGAGCCATGGTCAATGCATTTGTTAATATTATTTGGGAAGACATTGAAGAGACACAAAAGCTTTGCCTTGAACTCAGTTTGTTTGTTCACAATATTAAAGATGGGGTGCCAAGGATGACCTTGATGTCTAATTGGGTTAATACTGCAGTATCACACAAACTTGAAGCAGCACAGCATCTCTTCACAATTGATTCAGTTGATATTGAGTTAGAATACACAAGAATACAAGCAGGAAATGACATCGAAGAGCTTCAAGATCGCTCTATCTTGCTGCAGTGTCGAAGTGGATATGTCCGTTTGCCGGTAGAAACCTATGATATGATAAAATCATTACACTCTTTGAATCCTTCCATCATAAGGAATGGTGCATTAGGATTGACAGAGATACCACACATCACACGATGGCATGGTCTTATTCGAATTGAATTGATGGATAATAAAATATGTGAGCTACCACCATCACCAGATTGCCCCAAACTCAGAGTACTGTTATTGCAAGGGAATGTTGATTTGACAGATATTCCCAACTCATTTTTTGACCACATGCCTATGCTTCGATACTTGGACTTGTCTTATACTAGTATAAGGGATTTGCCTCATTCTATTTCCAAGTTGACAGATCTTAAGAAATTTTATCTCAAATGTTGTGATCTCTTCATGGAACTACCACCGGAAATTGGACAGCTGAAGAATCTTGAAGAACTTGATCTTGATGAGACTTTAATAACACATCTGCCAAAAGAGGTTCAAGGATTGATCAACTTGCAAAGCCTAACCCTTTGCTTTGAAGGATACCATCATGTATTTGGACATGGCAGAAAAGACAAGCAAATTTCCAACTCAACAATTATTCCTCCAGGAGTGATATCAAATCTCACTCAATTAAATTATTTAACCATCAATGTTGATCCTGAAGATGAGCGATGGAATGAGAATATAGTTGTCATTCTGCCAGAAGTTCTAAGGTTGGAGAACTTGCAGAGCGTTACAATATATGTCCCAAATGCTGAACTTTTGGAACTCATACCCCCCCACAAATCCCTCAATTTCAGATTGGTTGTTGGTCATCATATGCGTCGTTTCATATCACGTGTAACACTTGAAGTGGAGGAAAAGTTCAAGCACTCTAGCTCTAGTATTAAATTTGTGAATGGTGTAAATGTACCAAATGGAGTGAAAATGAATCTTTGGCGTTTCAGGACTTTATACTTGGACCGACATATGACCATCAAGAGTCTCTCTGAATTTGAGTTGAAGAATTTAAACAGGTTGCAAGCATGCATATTGGCAGAATGTAATGAAATGGAGACAGTTGTTGGTGGAAGTTATTTAGATAAAGGATTTGAGCGTGTCCTTTCAAATTTGAAGTCTTTGAGTGTATTCTATATGAAGAATCTAAGAAGCATTTACAAAGCAACAACTCCTGGCTTCTATTGCTTGAAGTCTATAGCATTGCACACTTGTCCCATGTTAACTACCATCTTCACCTCAAGTTTTATCCGCAACCTTTCCTCATTGGAGGAGCTTATAGTTGAAGACTGTCCAAAAGTAACTACCCTTATAAGTCATGACTCATCGGAACATGAAACACATATTTTCCTCCCTAGGTTGAGAATGATATCACTTCTCTATCTTCCTGAATTGGTCAGCATTTTTAGTGGGTTGCATGTTAAACATGGTATAGAAAAAATGGGATTTTATTATTGCCCAAAACTCCAAAGTCTTTCTAAATCAGAGTTATCAAGTGAATCTCTAAGGGTCATTAGAGGAGAAAACAAGTGGTGGGAAGCATTAAAATGGAATGAAGCAGAATGGGGATGTGCAAGTCGACCCAATTTTCTTAATCCAATTTTTTCCCCAATTAATGAGGAGACCGACATAATGACCCAACTAGCTGCACATGACAACAGGGACCAGTTCTTTTCGAGAGAAGTTTCTTTTACTTTTCCTTCCATTCGACAAATGGAGGTGACATATGACAAACATCATGAAGAAAAGCAGCAATTTACTGATTACTTTGTCAAAACCAATAAAAATCAAAGTAATGTGGAAGTAGTTAAAATGAAGGCTGGAATGGACCGGCCTGAAAAGGAGAGAGAAAGTTTTCTGGACAAGGAGATAAAGCTTCAAATGACTACTAGCAAGTGTGACAATGAGGACCAGGATGAATCTAATACTTGGGAAGCTGACATTTTTTATGGAAATAGTGCCACAAATAAGCCACTCCCAATGAAGGCAACAGACAGGCAGTTAAGTTGGAAGGACATTGAAATAATCAAAGTTATTGGAAAGGGAAATGAAGGGGTAGTGCAATTGGTGAAACACAAATGGACTGGTCAGTTTTTTGCGTTAAAGGTAATTCGAATGAATATTGAGGACTCTATGCGCAAGCAGATGGCACAAAAGCACAAAGTTAATCAATCAGCACAATGCCCTTATGTTGTTGTCTGCTACCAGTTATTCTATGATAATGGTGCCATGTCAATCTTCTTAGAGTACATGGATGGAGGTTCCTTAGCCGATCTTCTGAAGAAAGTTAAACTAATTCCAGAGCCTTATCTTGCTGCCATCTGTAAGCAGGTGCTGAAAGGTTTAGTGTATCTTCACCATGAAATACATATTATCCATAGAGACTTAAAGCCTTCTAATTTGTTGATAAATTATAGAGGCGAAGTAAAGATTACTGATTTTAGTGCGAGTGCAATTATGGAAACTGCATCTGATCAAGCAAATACTTTCATTGGCACATTCAACTATATGTCTCCAGAGAGAATCAGTGGAAGCCGCCATGGCTACAACTACAAAAGTGATATATGGAGTTTCGGACTAATATTGCTCGAGTGTGCTATGGGGCGGTTTCCATATACACCACCTGATCAAAGTGAAAGATGGGAAAGTTGTTTTGAGCTTATGGAGGCTATTGTTGACCAACCTCCTCCTAGTGCTCCATCCGAACAATTTTCTACAGAATTTTGCACATTTATCTCAGCATGTCTGCAGAAAGACCCGAAGGATAGACCGTCAGCTAAGGAACTTGTAAAACATCCTTTCATCGACATGTATGAGGACTTGGATGTGGACCTTTCAGCTTACTTCTCCAATGCAGGATCTCCACCTGCAACCTTATAA 4272 0.3961 MDSRLRKVSGSLVRGTEEMLSAKDKFSYKEELLHLVRTRDFISLLLSYPVKLEEEGILKAWINAFSQWRAQLLTWMSTDDHDGMTDKPWRELTQKALRCMEGLMPNEMILQIEHSGRFDYHNTEIPEAILDLTVDLAIEQLIQTLFSRDDYVRNIRYVRLSTRDFAEKRSVVDKIAAALEDRRNLFGNDKDFLRALWIDALIYQSDVEVRVQEEINAMMAGVVTEDDDILRTRGVEEEMANNRHLVILVDGDSYKKLDPRKVHFPVGTVVLLITTEPSAQTQEGDELTCIMDLNIRTLDHALPWEVFCNHAGSSVVYAPRAIQRIAVQIVGECRGHLLAIVLVAKSLRNVKGTKQWKLALDKLSYTNPSYDYQESDRIGISRAMVNAFVNIIWEDIEETQKLCLELSLFVHNIKDGVPRMTLMSNWVNTAVSHKLEAAQHLFTIDSVDIELEYTRIQAGNDIEELQDRSILLQCRSGYVRLPVETYDMIKSLHSLNPSIIRNGALGLTEIPHITRWHGLIRIELMDNKICELPPSPDCPKLRVLLLQGNVDLTDIPNSFFDHMPMLRYLDLSYTSIRDLPHSISKLTDLKKFYLKCCDLFMELPPEIGQLKNLEELDLDETLITHLPKEVQGLINLQSLTLCFEGYHHVFGHGRKDKQISNSTIIPPGVISNLTQLNYLTINVDPEDERWNENIVVILPEVLRLENLQSVTIYVPNAELLELIPPHKSLNFRLVVGHHMRRFISRVTLEVEEKFKHSSSSIKFVNGVNVPNGVKMNLWRFRTLYLDRHMTIKSLSEFELKNLNRLQACILAECNEMETVVGGSYLDKGFERVLSNLKSLSVFYMKNLRSIYKATTPGFYCLKSIALHTCPMLTTIFTSSFIRNLSSLEELIVEDCPKVTTLISHDSSEHETHIFLPRLRMISLLYLPELVSIFSGLHVKHGIEKMGFYYCPKLQSLSKSELSSESLRVIRGENKWWEALKWNEAEWGCASRPNFLNPIFSPINEETDIMTQLAAHDNRDQFFSREVSFTFPSIRQMEVTYDKHHEEKQQFTDYFVKTNKNQSNVEVVKMKAGMDRPEKERESFLDKEIKLQMTTSKCDNEDQDESNTWEADIFYGNSATNKPLPMKATDRQLSWKDIEIIKVIGKGNEGVVQLVKHKWTGQFFALKVIRMNIEDSMRKQMAQKHKVNQSAQCPYVVVCYQLFYDNGAMSIFLEYMDGGSLADLLKKVKLIPEPYLAAICKQVLKGLVYLHHEIHIIHRDLKPSNLLINYRGEVKITDFSASAIMETASDQANTFIGTFNYMSPERISGSRHGYNYKSDIWSFGLILLECAMGRFPYTPPDQSERWESCFELMEAIVDQPPPSAPSEQFSTEFCTFISACLQKDPKDRPSAKELVKHPFIDMYEDLDVDLSAYFSNAGSPPATL* 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01105 1423 CDD PKc_MAPKK_plant_like 1136 1403 - -
Rops2g01105 1423 Gene3D Ribonuclease Inhibitor 481 713 IPR032675 -
Rops2g01105 1423 SMART LRR_typ_2 563 586 IPR003591 -
Rops2g01105 1423 SMART LRR_typ_2 610 632 IPR003591 -
Rops2g01105 1423 SMART LRR_typ_2 538 562 IPR003591 -
Rops2g01105 1423 FunFam Mitogen-activated protein kinase kinase 1 1118 1216 - -
Rops2g01105 1423 SMART serkin_6 1137 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01105 1423 Pfam NB-ARC domain 201 367 IPR002182 GO:0043531
Rops2g01105 1423 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 1039 1414 - -
Rops2g01105 1423 SUPERFAMILY L domain-like 506 959 - -
Rops2g01105 1423 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Rops2g01105 1423 Gene3D - 298 376 IPR042197 -
Rops2g01105 1423 SUPERFAMILY Protein kinase-like (PK-like) 1130 1404 IPR011009 -
Rops2g01105 1423 Gene3D Ribonuclease Inhibitor 753 980 IPR032675 -
Rops2g01105 1423 ProSiteProfiles Protein kinase domain profile. 1137 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01105 1423 FunFam Mitogen-activated protein kinase kinase 6 1218 1418 - -
Rops2g01105 1423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1255 1267 IPR008271 GO:0004672|GO:0006468
Rops2g01105 1423 Gene3D Phosphorylase Kinase; domain 1 1115 1216 - -
Rops2g01105 1423 Pfam Protein kinase domain 1138 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01105 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 404 IPR027417 -
Rops2g01105 1423 Gene3D Transferase(Phosphotransferase) domain 1 1217 1419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01105 Rops-Chr2 15713091 15731858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01105 1117 1420 MAP Kinase Kinase Gene Family AT4G26070 63.399 3.62e-133 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops2g01105 Pkinase 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01105 - - gmx:102668266 1224.92