Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01097 ATGGGCAATTGTTGGTATAGATGGGAATCATCAGATTATAGAGTCTCATCCAATGCAAAATCAGAACAAAACCAGGCAATCAAACAAAGCTACGATGATAGTAAGTTACCATCCAACCCTGAAGAAGTAGAAGACCTACGCCGTGATTCAGCTACAAATCCATTGATTGCATTCACTTATGATGAGCTAAAGATAATCACTGGAAATTTTAGGCCAGATCGTGTCTTGGGGGGTGGTGGATTTGGAAGTGTTTATAAAGGGTTCATCTCTGAGGAGTTCAGGGAAGGGCTTCCACCTCTTCCTGTAGCTGTTAAGGTTCATGATGGTGGCAACAGTCATCAAGGTCACAGAGAATGGCTGGCAGAAGTTATATTTTTGGGGCAGCTTTCACATCCAAATCTTGTCAAATTAATTGGATACTGCTGTGAAGATGAACATAGGGTGCTAATATATGAGTACATGGCCAGGGGAAGTGTGGAAAACAATTTGTTCTCAAAAATTTTGCTTCCCATGCCATGGTCCATAAGAATGAAGATTGCATTTGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTATCGTGATTTCAAGACATCAAATATTTTATTGGACCTGGACTATAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCAGTTGGAGACAAATCCCATGTTTCTACTAGAATAATGGGAACATATGGGTATGCTGCACCTGAATACATAATGACAGGTCATCTGACCCCTAGAAGTGATGTTTATAGTTTTGGTGTTGTTCTGCTTGAACTTCTCACTGGAAGAAAATGTTTTGACAAGTTAAGACCTGCTAGAGAGCAGAACCTAGCAGATTGGGCTCTTCCTTTACTGAAGGAAAAGAAGAAATTGCTAAACATTATAGATCCAAGGCTAGAAGGTGATTATCCAATAAAAGGAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTCTAATGAGAGATATTGTAGATTCATTGGAGCCTTTGATGGCATACAATGAGGTCTCTATTCAAAAAACTTTGACCATAATCAGTGAGGTTCCTGAAGCGGACTTGAAAAAGAAAGCTGCAGAATGA 1143 0.4051 MGNCWYRWESSDYRVSSNAKSEQNQAIKQSYDDSKLPSNPEEVEDLRRDSATNPLIAFTYDELKIITGNFRPDRVLGGGGFGSVYKGFISEEFREGLPPLPVAVKVHDGGNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSKILLPMPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKCFDKLRPAREQNLADWALPLLKEKKKLLNIIDPRLEGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLMAYNEVSIQKTLTIISEVPEADLKKKAAE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01097 380 MobiDBLite consensus disorder prediction 17 34 - -
Rops2g01097 380 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01097 380 Gene3D Phosphorylase Kinase; domain 1 31 153 - -
Rops2g01097 380 MobiDBLite consensus disorder prediction 17 47 - -
Rops2g01097 380 FunFam Serine/threonine-protein kinase BIK1 37 153 - -
Rops2g01097 380 FunFam Probable serine/threonine-protein kinase PBL8 154 367 - -
Rops2g01097 380 SUPERFAMILY Protein kinase-like (PK-like) 44 348 IPR011009 -
Rops2g01097 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Rops2g01097 380 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Rops2g01097 380 Gene3D Transferase(Phosphotransferase) domain 1 154 369 - -
Rops2g01097 380 PANTHER OS01G0588500 PROTEIN-RELATED 30 351 - -
Rops2g01097 380 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01097 Rops-Chr2 15500671 15508362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01097 3 348 Glycoside Hydrolase AT3G07070 46.629 1.58e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g01097 PK_Tyr_Ser-Thr 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01097 - - gmx:100775722 681.789