Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01095 ATGGAGGTCTCTAAGCTTGTAGTCTTGCCAGCAGTTTTGGCACTCTTTGTCCTTTGTCTTCATTTCATCACTAAAATTCTCAAACTCAGAAATCATCCAAACCTGCATCTTCCTCCTGGAAGCTCAGGATGGCCTATTGTTGGAGAAACCTTCGAAATAATTCAAACTGGTCCAGTGAGGTTTATGAAAGAGAGAATAAACAAATATGGTTCAAGGGTATTCAAGACTTCATTATTTGGAGAACCTATTGCTGTATTTTGTGGACGAGAAGGGAACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTCCAAGCATGGTGGCCCGGCTCAGTGAAGAAGCTGTTATGGTTGTCACTGATTAATAAGGTTGGTGATGAAGCAAAGTTGATGAGAAGGTTGCTTATGAGCTTTCTTAATGCAGAATCACTCAGAAATTTCTTGCCAAAAATGGATAGCGTTGCTCAGCACCATATAAACACACATTGGGAAGGAAAGAAGCAGGTGTTGGTCTATCCAGTACTAGCACTATACACCTTTGAATTGGCTTGCAGCTTATTTTTTAGCATTGAAGATTCTCTCCTTAAATCAAAGCTTTCGTCAGAACTTGAAGAATTTCTGAAAGGGCTCATTGGCTTCCCCATCAACTTGCCTGGAACAAGGTTTCATCGGGCAATGAAAGCTGCAAATGTAATAAGGAAAGAAATTAAAATGATTCTTAAGAAAAGGAAAGTGGTTTTGGAAGAAAAGAGAGTGTCACCTACACAAGACCTTTTATCACATTTGCTTGTTACATCTGACACCAGTGGAAGGTTTTTGACTGAAATGGAGATTATTGATAACATACTACTACTGCTTTTTGCTGGCCATGATACTTCTAGATCAGTGTTAACATCGGTCATGAAGTATCTGGGACAGTATCCTGAAGTTTATGAACAAGTCTTGAAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGAAGGGCAGTTATTGCAATGGCAGGATGTGCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTTATGAGGTTGTCGCCTGCCGTGACTGGTTCTTACAGAGAAGCGATAAAGGATTTCACATATGCTGACTATCACATCCCTAAAGGGTGGAAGTTGCATTGGAGCACTACTTCATCACACATGGATCCAAAACTCTTCTCAAATCCTGAAGTTTTTGATGCTTCAAGGTTTGAAGGAGAAGGACCAGAACCCTTTTCTTATGTTCCATTTGGAGGAGGACCTCGAATGTGTATGGGACAAGAGTTTGCTCGGCTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGTTTCAAGTGGGATTTAGTGAATCCTGATGAAAAGTTCAAGTATGATCCCATGCTAGAACCAGCAAATGGACTTCCAATTCGACTTCATCCTTACCATTCCTAG 1434 0.4003 MEVSKLVVLPAVLALFVLCLHFITKILKLRNHPNLHLPPGSSGWPIVGETFEIIQTGPVRFMKERINKYGSRVFKTSLFGEPIAVFCGREGNKFLFSNENKNVQAWWPGSVKKLLWLSLINKVGDEAKLMRRLLMSFLNAESLRNFLPKMDSVAQHHINTHWEGKKQVLVYPVLALYTFELACSLFFSIEDSLLKSKLSSELEEFLKGLIGFPINLPGTRFHRAMKAANVIRKEIKMILKKRKVVLEEKRVSPTQDLLSHLLVTSDTSGRFLTEMEIIDNILLLLFAGHDTSRSVLTSVMKYLGQYPEVYEQVLKEQLEISQGKEEGQLLQWQDVQKMKYSWNVASEVMRLSPAVTGSYREAIKDFTYADYHIPKGWKLHWSTTSSHMDPKLFSNPEVFDASRFEGEGPEPFSYVPFGGGPRMCMGQEFARLEILVFMHNIVKRFKWDLVNPDEKFKYDPMLEPANGLPIRLHPYHS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01095 477 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 CDD CYP90-like 65 474 - -
Rops2g01095 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 FunFam Taxadiene 5-alpha hydroxylase 28 475 - -
Rops2g01095 477 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PANTHER CYTOCHROME P450 26 33 460 - -
Rops2g01095 477 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01095 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Rops2g01095 477 Gene3D Cytochrome P450 27 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01095 Rops-Chr2 15483633 15493143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01095 31 379 Cytochrome P450 AT5G36110 42.416 6.63e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01095 - - gmx:100808690 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01095 2 15483633 15493143 Rops2g01095 2 15483633 15493143 ECH