Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01094 ATGCCATTGGTGGTGGTGGTAGCTGCAGATGCAAACTCAACACATGACGATAATGGTGGCAAGATGCCCTTATCAACTTGTATTGAACAATGCATGCCCATATGCATGAAAATAAAATATGCAAAAGATGAACTTTGCCTAGAGGCATGCACTCCAGGATGCAAGCAATTGCAAGGCAAAGTTTTGGCACTCTTTGTCCTTTGTTTTCATTTCATCACTAAAATTGTCAAATTCAGAAACCTGCATCTTCCTCTTGGAAGCTCAGGATGGCCTATTGTTGGAGAAACCTTTCAGTTCCTGCAAGCATGTCTTGAGGGCAGCCCATTAAAGTTCATTCAAGAGAGAATGAACAAATATAACTCAAGGGTATTCAAGACTTCATTGTTTGGAGACCCTGTTGCTGTATTTTGTGGACCAGCAGGGAACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTCCAAGTATGGTGGCCAAGCTCAGTGAAGAAGCTGTTAAGGTTGTCACTGGTTAATAGGGTTGGTGATGAAGCGAAGTTGATGAGAAGGTTGCTTATGAGCTTTCTTAATGCAGAATCACTCAGAAATTTCTTGCCAAAAATGGATAGCATTGCTCAGCAGCACATAAACACACATTGGAAAGGAAAGGAGCAGGTGGCTGTCTATCCCATAGTACAGCTATACACATTTGAATTGGCTTGTAGCTTGTTTTTAAGCATTGAAGATTCTCTCCTTATATCAAAGCTTTCGTCAGAATTTGAAGAACTTCTAAAAGGGATTATTGGCTTCACCATCAACTTGCCTGGAACAAGGTTTCATCGGGCAATGAAAGCTACAAATGTAATAAGGAAAGAAATCAAAATGATTATTAAGAAAAGGAAAGTGGATTTGGAAGAAAAGAGAGTGTCACCTACACAAGACCTTTTATCACATTTGCTTGTTACATCTGACACCAGTGGAAGGTTTTTGACTGAAATGGAGATTATTGATAACATACTACTACTGCTTTTTGCTGGCCATGATACTTCTAGGTCAGTGTTAACATCGGTCATGAAGTATCTGGGACAGTATCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGAAGGGCAGTTATTGCAATGGCAGGATGTTCAGAAAATGAAATACTCTTGGAATGTTGTATCTGAAGTTATAAGGTTGTCCCCACCCGTGACTGGTGCTTTCAGAGAAGCCATAAAAGATTTCACATATGCTGATTATCACATCCCTAAAGGGTGGAAGTTGCATTGGACCACTACTTCATCACACATGGATCCAACAGTCTTCTCGAATCCTGAAACTTTTGATGCTTCAAGGTTTGAAGGAGAAGGGCTAACATCCTTTTCTTATGTTCCATTTGGAGGAGGACCTCGAATGTGTATGGGACAAGAGTTTGCTCGGCTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGTTTCAAGTGGGATTTAGTGAATCCTGATGAAAAGTTCAAGTATGATCCCATGCTAGAACCAGCAAATGGACTTCCAATTCGCCTTCACCCTTCCCATTTCTGGCCAAATAACTTCTCCATACATATAGCACATTGA 1617 0.4014 MPLVVVVAADANSTHDDNGGKMPLSTCIEQCMPICMKIKYAKDELCLEACTPGCKQLQGKVLALFVLCFHFITKIVKFRNLHLPLGSSGWPIVGETFQFLQACLEGSPLKFIQERMNKYNSRVFKTSLFGDPVAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNRVGDEAKLMRRLLMSFLNAESLRNFLPKMDSIAQQHINTHWKGKEQVAVYPIVQLYTFELACSLFLSIEDSLLISKLSSEFEELLKGIIGFTINLPGTRFHRAMKATNVIRKEIKMIIKKRKVDLEEKRVSPTQDLLSHLLVTSDTSGRFLTEMEIIDNILLLLFAGHDTSRSVLTSVMKYLGQYPEVYEQVLKEQLEISQGKEEGQLLQWQDVQKMKYSWNVVSEVIRLSPPVTGAFREAIKDFTYADYHIPKGWKLHWTTTSSHMDPTVFSNPETFDASRFEGEGLTSFSYVPFGGGPRMCMGQEFARLEILVFMHNIVKRFKWDLVNPDEKFKYDPMLEPANGLPIRLHPSHFWPNNFSIHIAH* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01094 538 SUPERFAMILY Cytochrome P450 77 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 CDD CYP90-like 115 524 - -
Rops2g01094 538 Pfam Cytochrome P450 84 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 Gene3D Cytochrome P450 72 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01094 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Rops2g01094 538 PANTHER CYTOCHROME P450 26 81 510 - -
Rops2g01094 538 FunFam Taxadiene 5-alpha hydroxylase 74 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01094 Rops-Chr2 15473702 15490591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01094 82 429 Cytochrome P450 AT5G36110 44.444 1.54e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01094 - - gmx:100778139 768.844