Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01081 ATGAAGCTTCGTCACTGCTCTGTCGCAAGTCCTTTGCAGCACCGTCGCAGGTCCGTCAATGGCTTGAAGAGAAAAAATGAAATAAATGTGACCTCTGTAGAGGCTTTAGGCACATCTGGCTTTCCACATATGAACCATCTTAAATATAGTTCAGTACCCCTGACAACGTTGAGACGCTTTGCAAGCAGAGAAAATGGGAGAGTCTCCTTCCTTGGATCCGATGCTAGATATGAGGGGTTGAGTGGAATCGTACTCGAAGATGCAACTAGTGGCCTCAGCTTCAACCAGAAGAGAAAGAAAGAAAGGGATCTCGAATCTTCAATCTGCAAAGGTATTGATTCTGCTTCTATGGCAAATTCAAAGGGCTCATCGGGTATCAGAAATTTGATGTATCCTGGAAAGCATGCTCTGCTTCCTCCTAAAAGCCCATTTCCTAGTGTTTCTCAAGCATATGCTGATTATATACCAAATCCTGCAGTTGGTTCAAAAGCTGCTAATAGACCTAGAGAGGGAAATACACACCACCAACGTACTTCATCTGAGAGCCTTATTGAGGAGCAACCTTCATGGCTTGATGATCTCCTTAATGAACCAGAGACACCTGTCCGGAGGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATACATAGACACGGTTAATGCATCTAACATCAGTTATGCAGATCAGGATGAGTATAGATATAAGAATTTGATATCTGTTCCATCTTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCATCATGTACCCATGTATGCAGAAATGAACTCATCAAAACAGAAAAATAGGTCCTGGGACTCTTTTTCTAATGCTGTGACAAATCTGGGTGGTGCTCCATCTTGCAAAAACAATGTTGCTTTTCAAAGTTCAGGATCATCGACGCCGTGTACACCACATGAAGTGGATGGGCTTCAACCAACTGCAAATGAAAAGCATGATTCAGTGGAATCTGGCTTACAGGATGCAAAATCATCTTCTGAAAGAAAGGATGGTTCACATGCAAAGTCATCTGCTTCTGAAACAGATACAAAACGTGCTAAACAGCAATTTGCTCAACGCTCACGGGTTCGTAAACTTCAGTACATTGCTGAGCTAGAAAGAAATGTACAAGCTTTCCAGGCTGAAGGGTCTGAAGTCTCAGCTGAGCTTGAATTTCTTAACCAGCAAAATCTTATCCTGAACATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATCGGAAGATTACGAGCGTTGCATCAGCAGCAGCAGCTGCAGCAGACACATCAGCCTCAACAACAACCATCCGCGAGTCATAGACGCAACAACAGCAGAGACCTTGAATCTCAGTTTGCAAACCTTTCTCTAAAGCACAAGGACACCAATTCAGGGCATGACCCTGCACTCAGAATTTAG 1482 0.4339 MKLRHCSVASPLQHRRRSVNGLKRKNEINVTSVEALGTSGFPHMNHLKYSSVPLTTLRRFASRENGRVSFLGSDARYEGLSGIVLEDATSGLSFNQKRKKERDLESSICKGIDSASMANSKGSSGIRNLMYPGKHALLPPKSPFPSVSQAYADYIPNPAVGSKAANRPREGNTHHQRTSSESLIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNISYADQDEYRYKNLISVPSWSSQDFDRSKDAHHVPMYAEMNSSKQKNRSWDSFSNAVTNLGGAPSCKNNVAFQSSGSSTPCTPHEVDGLQPTANEKHDSVESGLQDAKSSSERKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQAFQAEGSEVSAELEFLNQQNLILNMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRALHQQQQLQQTHQPQQQPSASHRRNNSRDLESQFANLSLKHKDTNSGHDPALRI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01081 493 Coils Coil 372 420 - -
Rops2g01081 493 MobiDBLite consensus disorder prediction 159 186 - -
Rops2g01081 493 SMART brlzneu 350 409 IPR004827 GO:0003700|GO:0006355
Rops2g01081 493 SUPERFAMILY Leucine zipper domain 361 403 IPR046347 GO:0003700|GO:0006355
Rops2g01081 493 MobiDBLite consensus disorder prediction 442 467 - -
Rops2g01081 493 MobiDBLite consensus disorder prediction 442 462 - -
Rops2g01081 493 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g01081 493 MobiDBLite consensus disorder prediction 296 361 - -
Rops2g01081 493 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 126 478 IPR044797 -
Rops2g01081 493 MobiDBLite consensus disorder prediction 296 310 - -
Rops2g01081 493 Gene3D - 354 405 - -
Rops2g01081 493 MobiDBLite consensus disorder prediction 315 359 - -
Rops2g01081 493 CDD bZIP_plant_RF2 352 400 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01081 Rops-Chr2 15319296 15333911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01081 186 424 bZIP Transcription Factor Family AT2G42380 33.071 4.33e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01081 - - gmx:100813098 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01081 2 15319296 15333911 Rops2g01081 2 15319296 15333911 ECH