Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01080 ATGGGTAAGGGACCCTTCTCCTTTCGCCGCTCTGCCTCTCGTCGCCGCCACAAGAAGCCATCGGGACCGTCGCATTCGCCGCCGCTCATGGCTGAAATTACCGGTTCTCCGGCGGAGAACACCGATAACCGTTTGATCATCGGAGGAAACGGCGGCGTGGTGACGAAGGCGAAGAAGAAGACCGGCGGAGCCAGGTTGTGGATGCGGTTCGACCGGTCCGGCCGGTCGGAACTCGTGGAGTGGGAGAAGAACACGATCATCCGCCACGCTTCGATTCCCGCCAGAGACTTGAGAATTCTGGGCCCGGTTTTCTCCCATTCCTCCAATATTCTTGCGAGAGAGAAAGCAATGGTTGTTAATTTGGAGTTTATAAAGGCTATTGTAACAGCTGAAGAAGTGTTATTGCTTGATCCTCTTAGGCAAGAGGTTCTTCCATTTGTTGAACAACTAAGGCAACAACTTCCACATAAGAATCAACCTAAAGTTGATGGGCATGTGGATGAAAATGAAACTGAATTGCCGGTTTCTGCTGCTACTAATGGAAGACAATGGTTACCTGGGCCTGATTCTGCTGAAGCTGAGCTTCCATTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAAGTTGTGTGTACTTATCTGGACTCCAGTGTGGCTGACCTTGAGAGAGGTGCTTACCCTGTTTTGGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTTGAACATGTGAGGAGTTTGAAGAGCAATCTTACTCGTTTGCTGGCACGTGTGCAAAAGGTGCGAGATGAAATTGAACATTTATTAGATGACAATGAAGACATGGCACAACTGTATTTGACAAGGAAGTGGTTGCAAAATCAGCAATTTGAGGCTAATTCAGGAGCCACGGCCTCAAATAACCTTTCAAATACCACACTTGTTGTTCGTCGACTTGGTTCTACCAGAAGTGGAAGTCTTGTGACTAGCAACTATGGGGATGATAATGATGTGGAAGACTTGGAGATGTTGCTTGAGGCATATTTCATGCAGTTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAATATATTGATGACACTGAAGACTATGTCAACATTCAACTTGATAACCATCGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCATTTGCTATTGCTGTTGAAACTATGATTGCTGGTGCATTTGGGATGAACATTCATTGTACATTATATGATACAAATGGAATATTTGGGACCGTTGTGGGAATCATGTCTGCAACTTGCGTATTGCTTTTCGTGCTTGTTTTTGCATATGCAAAATGGAAAAAGTTGTTGGGATCATAA 1338 0.4492 MGKGPFSFRRSASRRRHKKPSGPSHSPPLMAEITGSPAENTDNRLIIGGNGGVVTKAKKKTGGARLWMRFDRSGRSELVEWEKNTIIRHASIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKNQPKVDGHVDENETELPVSAATNGRQWLPGPDSAEAELPFEFQVLEIALEVVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEANSGATASNNLSNTTLVVRRLGSTRSGSLVTSNYGDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETMIAGAFGMNIHCTLYDTNGIFGTVVGIMSATCVLLFVLVFAYAKWKKLLGS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01080 445 MobiDBLite consensus disorder prediction 1 36 - -
Rops2g01080 445 Coils Coil 243 277 - -
Rops2g01080 445 CDD Mrs2_Mfm1p-like 67 442 IPR039204 -
Rops2g01080 445 Gene3D Magnesium transport protein CorA, transmembrane region 383 440 - -
Rops2g01080 445 FunFam Magnesium transporter MRS2-1 55 138 - -
Rops2g01080 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 26 443 IPR039204 -
Rops2g01080 445 Gene3D - 53 138 - -
Rops2g01080 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 433 IPR045863 -
Rops2g01080 445 Gene3D Magnesium transport protein CorA, transmembrane region 139 376 - -
Rops2g01080 445 Pfam CorA-like Mg2+ transporter protein 331 433 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01080 Rops-Chr2 15310266 15314010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01080 1 445 MRS2 Gene Family AT3G58970 65.929 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01080 K16075 - gmx:100812561 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01080 2 15310266 15314010 Rops11g03768 11 71380389 71382568 PCT