Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01053 ATGAAGAAGAAGAAGAAGCTAATCTCTTGTTCCATTTCTTCTCAGTCTTCCCCTTTCGATCTTTCCCCTCCTCCCATCGACCATGACTTCCTGGACACTGTGAAGACTGCAGGAGCTGAGGTTTCTGGGGAAGGGATCGTTGAAACATTTCATAATGATGAAGAAGCACTCGATGCTGCAGACAACGGGGTTGTTGTTGTGGATCTTTCACACTTTGGCCGGATAAGAGTCAGTGGAGAAGATCGCATTCAGTTCCTTCACAACCAGAGTACTGCAAACTTTGAATGTCTACAGGCAGGGCAAGGATGTGACACTGTTTTTGTAACACCAACAGCTCGAACAATAGATATTGCACACGCATGGGTCATGAAAAATGCAATAACATTAGTGGTTTCACCAGAGACATGTAGTACCATTACTGAAATGCTGAACAAGTACATATTCTTTGCTGATAAGGTAGAGATTCAAGACATCACTAAGAAAACCAGCTTATTTGTTTTGGTGGGACCCAAAAGTGACCAAGTGATGGAGAACTTGAACCTTGGTGATCTTGTTGGAAAACCATACGGAACACATCAACATTTTAGTGTTGATAAGCAGCCTGTAACTATAGGGGTTGGAAATATCCTTTCTGAAGGTGGTTTTACATTGTTGATGTCTCCAGCGGCTGCTCCATCTGTCTGGAAAGCTATTCTTGCTCAAGGGGCTGTCCCAATGGGTTCTAATGCCTGGAATAAATTACGGGTTATTCGAGGAAGGCCTGCTCCTGGAATGGAGCTTACAAAAGAATTCAATGTCCTGGAGGCTCATCTATGGAACTCAATTTCTCTAAATAAAGGTTGTTACAAAGGACAGGAGACTATATCTAGACTCATAACATATGATGGAGTCAAGCAAAGGTTATGGGGGTTTCGTCTTTCTGCAGCCGCAGAACCTGGCAGTATTATTACATTTGATGGGAAAAAGGTTGGAAAGTTGACTAGTTATGCATCTGGAAGGAAGCAATCTGAACACTTTGGATTAGGCTATGTCAAGAGGCAAGCTGCTTTGGAAGGAGACACTGTAATTGTTGGAGACAACATCAGTGCAACAGTGGTGGAAGTACCTTTTCTTTCTCAGCAGTGCCCTCCATCTGATCCATGTTTAGCAGCACCCTCTCCCTCCACCAACAACAAATCCATGTGCCCAGTGTCCATGAATTATGTGCCAAGAGTCCCTTGGAACTCTTCTAGTTGCCTTAACTTCCAACCCTTACCATCCAAAAAAGAAACACAAACAAGCACTTGTTGCAGAACTCTCTTGTATCTCTTTGGCATAGCACTTGCTGAAAACCTCAAAAGAAACTCCCTTTTCCAACTCCACAATCTTTCAACCTCTATCTCTTGCCTTCAAGACTTCCAATCCAAACTCACTTCCCTTTCACTTCCCAATAATCTTGTGTCTTTTTGTTTTGATCCACTTCAATTTGTTATCACTCCCAACATGTGTGCTAATATTCAAACTAAGCAAGATTGGCACAGCAAGGTTGGTTCCAAAAATACTGAACTTGTTGACACTGCATGTAAGCCAGACCTCACTGATCTTGCCCACTGCAGTAAGTGTAGAAGGGAGGGGGACAAGGTTCGGCAGATGCTGACTGTAATTGATGGTAATGATTCACATTCCGAAGCCTGCTTTTACTTCACAGTACTTTATATTGCTGGGGTTGTGAATAATTTTGGCCCTGAGAGTAAAGGTATGAGGGCAAGGGTTGCAGATTTTGGGCTAGCCAAGCAAAGCAATGAAGGTATGTCTCAGCTAACTACTAGAATAGCTGGAACTTATGGATATCTAGCCCCAGAATATGCACTTTATGGCCAGCTAAGTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGAAGAAAAGCTCTTGAGTTGTCTTCATCAGGAACACCTACTTTCTTGATCACAGATTGGGTTTGGTCATTAATGAAATCTGGAAACATAGAAAAGGCTTTGGATGCTTCTATCTTATTAGATGGAAATTCCACTAGAAATATAATGGAGAGATTTTTACTGGTTGGAATTCTGTCTTCTCATGTAGTGGTTGCTTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGACATTGAAGTTTCACCAATTCCAGATAGGCCAATGACTCTTGGGCACTATATGTTCTCCAATTGTGATTATTCCGGGATGAGCTCAGAATGTGGATCCGAAAGCTTGTGTGACATTAAAGGTTTTAGAATCCATCCTTGA 2295 0.4218 MKKKKKLISCSISSQSSPFDLSPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVSGEDRIQFLHNQSTANFECLQAGQGCDTVFVTPTARTIDIAHAWVMKNAITLVVSPETCSTITEMLNKYIFFADKVEIQDITKKTSLFVLVGPKSDQVMENLNLGDLVGKPYGTHQHFSVDKQPVTIGVGNILSEGGFTLLMSPAAAPSVWKAILAQGAVPMGSNAWNKLRVIRGRPAPGMELTKEFNVLEAHLWNSISLNKGCYKGQETISRLITYDGVKQRLWGFRLSAAAEPGSIITFDGKKVGKLTSYASGRKQSEHFGLGYVKRQAALEGDTVIVGDNISATVVEVPFLSQQCPPSDPCLAAPSPSTNNKSMCPVSMNYVPRVPWNSSSCLNFQPLPSKKETQTSTCCRTLLYLFGIALAENLKRNSLFQLHNLSTSISCLQDFQSKLTSLSLPNNLVSFCFDPLQFVITPNMCANIQTKQDWHSKVGSKNTELVDTACKPDLTDLAHCSKCRREGDKVRQMLTVIDGNDSHSEACFYFTVLYIAGVVNNFGPESKGMRARVADFGLAKQSNEGMSQLTTRIAGTYGYLAPEYALYGQLSEKSDVYSFGVVVLEIMCGRKALELSSSGTPTFLITDWVWSLMKSGNIEKALDASILLDGNSTRNIMERFLLVGILSSHVVVASRPTILDALKMLEGDIEVSPIPDRPMTLGHYMFSNCDYSGMSSECGSESLCDIKGFRIHP* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01053 764 Pfam Protein kinase domain 582 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01053 764 Gene3D Transferase(Phosphotransferase) domain 1 552 731 - -
Rops2g01053 764 Pfam Aminomethyltransferase folate-binding domain 55 271 IPR006222 -
Rops2g01053 764 NCBIfam folate-binding protein YgfZ 242 305 IPR017703 -
Rops2g01053 764 Pfam Glycine cleavage T-protein C-terminal barrel domain 300 370 IPR013977 -
Rops2g01053 764 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 577 724 - -
Rops2g01053 764 SUPERFAMILY Protein kinase-like (PK-like) 579 732 IPR011009 -
Rops2g01053 764 PANTHER AMINOMETHYLTRANSFERASE 11 374 IPR028896 -
Rops2g01053 764 SUPERFAMILY Aminomethyltransferase beta-barrel domain 301 373 IPR029043 -
Rops2g01053 764 SUPERFAMILY Folate-binding domain 48 292 - -
Rops2g01053 764 Gene3D Probable tRNA modification gtpase trme; domain 1 39 371 IPR027266 GO:0005515
Rops2g01053 764 Pfam SPARK 390 559 IPR043891 -
Rops2g01053 764 FunFam Slr0635 protein 41 371 - -
Rops2g01053 764 ProSiteProfiles Protein kinase domain profile. 351 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01053 Rops-Chr2 15008685 15019607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01053 580 734 Receptor kinase-like Gene Family AT1G11050 75.000 1.34e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Rops2g01053 GCV_T 2.1e-30 CL0289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01053 - - gmx:100814706 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01053 2 15008685 15019607 Rops2g01053 2 15008685 15019607 ECH