Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01044 ATGAGAAACTGGGGGAAATGGGTGTCTAAAATTCGCGAGCCAAGGAAGAAATCACGCATATGGCTAGGCACATTCCCTACACTAGAAATGGCTGCAAGAGTACACGACGTCGCTGCTCTCAGCATAAAGGGAAACGCCGCTATTCTTAACTTCCCTGAGCTTTCCAGCTCACTCCCACGACCCGCTTCACTCGCTCCTCGTGATGTTCAAGCTGCAGCAGCAAAAACAACTCACATGGACTTACCATCTTCAACAATGGACTTGTCTTCTGCTTCAGATGAATTGAGTGAGATAATTGAGCTTCCCAGGTTGGAAAGCAGTGATGAGTGTGAAAAGGTAGAAAGCCAAGAGGCCTTGTTTGTTCCAGTAAGTGCCAACAAAGCCAGCAAGAGAAACAAAGAGGATAAGGACACCAAGGATGAGAACATGTCAACGGAGTAG 441 0.4717 MRNWGKWVSKIREPRKKSRIWLGTFPTLEMAARVHDVAALSIKGNAAILNFPELSSSLPRPASLAPRDVQAAAAKTTHMDLPSSTMDLSSASDELSEIIELPRLESSDECEKVESQEALFVPVSANKASKRNKEDKDTKDENMSTE* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01044 146 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Rops2g01044 146 MobiDBLite consensus disorder prediction 77 92 - -
Rops2g01044 146 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Rops2g01044 146 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Rops2g01044 146 MobiDBLite consensus disorder prediction 73 93 - -
Rops2g01044 146 Pfam AP2 domain 3 44 IPR001471 GO:0003700|GO:0006355
Rops2g01044 146 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Rops2g01044 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 128 - -
Rops2g01044 146 SUPERFAMILY DNA-binding domain 2 52 IPR016177 GO:0003677
Rops2g01044 146 MobiDBLite consensus disorder prediction 115 146 - -
Rops2g01044 146 MobiDBLite consensus disorder prediction 128 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01044 Rops-Chr2 14839293 14839926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01044 1 111 AP2-EREBP Transcription Factor Family AT5G11590 58.955 2.49e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops2g01044 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01044 K09286 - gmx:100794316 182.185