Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01025 ATGGCTCTGGGAAGAGGCAGTGCAATGGTGCTACTACTAGTATGCTTGTTGGTGCTTCACTCTGAGATGGCTCATTCTGCTACCTACACGGTTGGAGGTGCAGGCGGTTGGACCTTTAACACTGTTGGGTGGCCTAGAGGAAAGCGCTTTAGGGCTGGTGACACTCTTGTATTCAACTATAACCCTGGGGCTCACAATGTGGTGGCGGTGAACAAGGCAGGCTATGATACATGCAAGACTCCAAGAGGAGCCAAAGTGTATAGGTCAGGAAAGGATCAGATCAAGCTTGCTAGGGGACAGAACTACTTCATCTGCAATTATGTGGGTCACTGCGAGTCTGCGATGAAAATTGCCATCAATGCTGCTTGA 369 0.4959 MALGRGSAMVLLLVCLLVLHSEMAHSATYTVGGAGGWTFNTVGWPRGKRFRAGDTLVFNYNPGAHNVVAVNKAGYDTCKTPRGAKVYRSGKDQIKLARGQNYFICNYVGHCESAMKIAINAA* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01025 122 CDD Plantacyanin 27 121 IPR041844 -
Rops2g01025 122 FunFam basic blue protein-like 27 121 - -
Rops2g01025 122 SUPERFAMILY Cupredoxins 27 121 IPR008972 -
Rops2g01025 122 Gene3D - 27 121 IPR008972 -
Rops2g01025 122 ProSiteProfiles Phytocyanin domain profile. 27 122 IPR003245 GO:0009055
Rops2g01025 122 PANTHER BLUE COPPER PROTEIN 22 120 IPR039391 GO:0009055
Rops2g01025 122 Pfam Plastocyanin-like domain 37 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01025 Rops-Chr2 14519395 14520802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01025 8 121 Phytocyanin Superfamily AT1G17800 40.336 4.95e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01025 - - gmx:100499869 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01025 2 14519395 14520802 Rops2g01025 2 14519395 14520802 ECH