Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01022 ATGGATATTCTCTTATTGCAATCCATGTTACTAATTGTGATCACCTTTATTGCGTCTATCTGTGTTATGCAGAAAAGAAAACCAGGTGGCACCACTAATAGCTTGCCCCCAGGTAGTTTTGGGTGGCCTCTGGTGGGTGAAACCTATCAATTTCTGTTCAACAAGATCGAGCATTTCCTTCAAGAGAGGGTAAAAAATTACTCCCTAGAGATCTTCAAGACAAAGTTACTAGGAGAGCCAATAGTGGTTCTTTGTGGTCCTGCTGCAAACAAATTTGTCTCCATGAATGAGCCAAAGCTTGTCAAAGTTTGGTACATGAAAACCCAGCGCAGGTTCTTCAATCTTCCTGAACAAACACATGCAGCTAAGCCAAAACAAGCAGCTGTAGCTTCTGCTCCAGTGAAGATCTTGGGGTTTCTGAAACCTGAAGGACTAGTTAGGTACATGGGGAACAGGTTTGAATCCATCATACACCAACACTTCATGACACACTGGGAAGGGAAAACAGAACTGAAGGTGTTTCCTTTGGTGAAGGCCTTTTCCTTTACACTGGTTTGTCAATTCTTCTTAGGCATTGATGAACCCCATCATGTAGCCAAGTTTGCCAGCAAGTTTGATGACTTGTATACCGGGCTTTACTCAGTTCCTGTGTATTTCCCGGGCTCTGCATATCATAGGGCACTGAAGGCTGCATCTGCAATTCGGAAAGAGATCCAATTTCTGATAAATGAGAAGATTGATGTCTTGTCCAAAGGGGAAGTCATGGATGACCTACTAGCACACATAGTTGGTGCTGAGCAGAATGGAAAATATGTTCCAAAAATTGAAATCAGCAACATCATCATGGGATTGATGAATTCCAGCTACACGCCAATAGCCATTACACTGGCTTTCATGATTAAACACATTGGACAGCGGCCTGATATTTACCAAAAAATCTTATCCGAGCATGCTGATATTACAAGATCAAAAGGATCTAGTACAGCACTAGATTGGGACAGCATACAGAAATTGAAATACACATGGGCTGTTGCACAGGAGACCATGAGACTCTACCCAACTGCACCAGGAGCATTCAGAGAGGCTGTAACAGATATCACCTATGAAGGTTTTACAATTCCAAAGGGATGGAAGATCTTTTGGGCAATTGCTGGAACAAATAAAAATCCCAAGTACTATGATGAACCTGATAGTTTTGATCCCTCGAGGTTTGAAGGGAATGTTCCTGCTCCATACACATATGTACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGAAAGGACTTCACACGGTTTGTGATTCTCACTTTCATTCACAATCTCATAACCAAGTTCAAGTGGGAAGTTATACTTCCTGATGAGAAAGTATCTGGTGCTTTGATACCAATCCCAGCAGAGGGAGTTCCTATCCGTTTGCATCACTTTTAA 1428 0.4244 MDILLLQSMLLIVITFIASICVMQKRKPGGTTNSLPPGSFGWPLVGETYQFLFNKIEHFLQERVKNYSLEIFKTKLLGEPIVVLCGPAANKFVSMNEPKLVKVWYMKTQRRFFNLPEQTHAAKPKQAAVASAPVKILGFLKPEGLVRYMGNRFESIIHQHFMTHWEGKTELKVFPLVKAFSFTLVCQFFLGIDEPHHVAKFASKFDDLYTGLYSVPVYFPGSAYHRALKAASAIRKEIQFLINEKIDVLSKGEVMDDLLAHIVGAEQNGKYVPKIEISNIIMGLMNSSYTPIAITLAFMIKHIGQRPDIYQKILSEHADITRSKGSSTALDWDSIQKLKYTWAVAQETMRLYPTAPGAFREAVTDITYEGFTIPKGWKIFWAIAGTNKNPKYYDEPDSFDPSRFEGNVPAPYTYVPFGAGPRSCPGKDFTRFVILTFIHNLITKFKWEVILPDEKVSGALIPIPAEGVPIRLHHF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01022 475 SUPERFAMILY Cytochrome P450 34 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS P450 superfamily signature 305 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 FunFam Taxadiene 5-alpha hydroxylase 26 475 - -
Rops2g01022 475 Gene3D Cytochrome P450 26 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 PANTHER CYTOCHROME P450 26 34 452 - -
Rops2g01022 475 Pfam Cytochrome P450 36 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01022 475 Coils Coil 475 475 - -
Rops2g01022 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Rops2g01022 475 CDD CYP90-like 63 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01022 Rops-Chr2 14427347 14429142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01022 34 379 Cytochrome P450 AT5G36110 32.958 3.69e-70 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01022 K20667 - gmx:100782971 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01022 2 14427347 14429142 Rops2g01022 2 14427347 14429142 ECH