Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01020 ATGCTTCTAATACCTTCCTTATGTCAAGATGATTCAGATGATGTAACTACTGCTGTGTACATTGTTACACTCAGACAAACTCCTTCTTCTCACTTTCAGGATGAGTTAACCAGAAATGATAACCACTTAAGACATGGTGCTTCTGGGAGAAATAGACTTCACAAACCAAGATATCAAAAGGTTAATAAGACAGGTAGGAGACATGGCTCTTCCATTGCCCAAGTTCATGATTCGTTGTTGAAGAAGGTGTTTAAAGGGGAGAAGTATCTAAAGCTCTACAGCTATCATTACTTAATCAATGGATTTGCTGTTCTGGTTACCCAACAACAGGCAGAGAAGCTATCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGAACTGCAACTACTCATACTCCACAATTTTTGGGTCTACCACGGGGAGCTTGGTTTCAATCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACTATTGCGTTTATTGACACTGGCATTGATCCTACACATCCTAGTTTTACTGATGATAAATCTGAACATCCGTTCCCTGTTCCTGCTCATTTTTCTGGTATTTGTGAGGTTACTCGGGATTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCCGTCATTTTGCAGCATCTGCTATAACCAGAGGAATATTTAATTCAACTCAGGACTATGATTCTCCTTTTGATGGCGATGGCCATGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCAGTGGTTGTTGCTGGGCATCATTTTGGAAATGCTAGCGGGATGGCTCCTCGTGCACACATTGCTGTTTACAAGGCGTTATACAAGAGATTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATAGGGTTGACATATTATGCTTGTCAATCACTCCTAATAGGCGTCCTCTTGGTATTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGAAATACTGGGCCATCACCTATGAGCATGTCCTCCTTTAGTCCATGGATCTTCACTATTGGTGCCGCCTCTCATGATCGAGCTTATAGCAACTCCCTATTTCTAGGAAATAATGTGACCATACTTGGAGTTGGAATTGCACCTGGCACATCTGAGAATGCAATGTATAAATTGATTCATGCACAGCATGCTTTGAACAATGACGCAACAGTTGCTGATGATATGTATGTTGGTGAGTGCCAAGATGCAAGTAAATACAATCAGGATTTGGTCCAGGGAAACCTCCTCATCTGTAGCTATTCCATCAATTACGTGCTTGGGCTCTCCAGCATCCAACAGGCCTTAGAAACGGCCATGAACCTTAGTGCGGTTGGTGTTGTTTTTCTCATGGATCCTTTTGTGACTGGTTTTCAGCTTAACCCAACTCCAATGAAATTGCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCACTGGAAAGAGATGGGGCTTTAAATAAAATTGTCAAATTTGGGGCTGTTGCTAGTATTGGTGGTGGACTAAAAGCCAACTACAATAATGCCGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCGTGAATCTGACATTTTGAAACCCAATTTGGTAGCTCCAGGAAATTTTATATGGGCTGCTTGGAGTTCTGTTGCCACTGATTCAGTGGAATTTTTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCACGTTGCTGGTGTTGCTGCACTAATTAAGCAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCCACCACAGCTTCTCTATTTGACAACAACGGGAAGCCAATAATGGCTCAGCGATCATATGCCTCCCCAGACCTAAACCAATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCCACTGCAGCATTAAATCCTGGATTGCTTTTTGATTCTAGTTATGATGATTACATGTCATTTTTATGTGGTATCAATGGCTCAGCTCCTACAGTGCTAAACTACACCGGTCAGAACTGTTGGATTTATAATTCAACTGTAGATGGCCCGGATCTGAACTTGCCCTCAATCACAATAGAAAAGTTGAACCAATCTAGAGTAGTACAGAGAACAGTCCAAAACATTGCTGGAAATGAAACTTATAATGTTGGTTGGAGTTCTCCTTATGGGGTTTCAGTGAAAGTGTCTCCAACTCGCTTCTCTATTGCTAATGGGGAAAGACAAGTCTTGTCTGTGATCTTTAATGCAACCAGCAACAGCTCTGTTGCCAGTTTTGGGAGGATTGGCCTGTTTGGTAACCAAGGTCATGTAATCAACATTCCTGTCTCGGTCATAGTTAAAATCTCTTATTAA 2478 0.4241 MLLIPSLCQDDSDDVTTAVYIVTLRQTPSSHFQDELTRNDNHLRHGASGRNRLHKPRYQKVNKTGRRHGSSIAQVHDSLLKKVFKGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRRREVSNVVLDFSVRTATTHTPQFLGLPRGAWFQSGGFETAGEGITIAFIDTGIDPTHPSFTDDKSEHPFPVPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYDSPFDGDGHGTHTASVAAGNHGIPVVVAGHHFGNASGMAPRAHIAVYKALYKRFGGFAADVVAAIDQAAQDRVDILCLSITPNRRPLGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTIGAASHDRAYSNSLFLGNNVTILGVGIAPGTSENAMYKLIHAQHALNNDATVADDMYVGECQDASKYNQDLVQGNLLICSYSINYVLGLSSIQQALETAMNLSAVGVVFLMDPFVTGFQLNPTPMKLPGIIIPSANDSKILLQYYNSSLERDGALNKIVKFGAVASIGGGLKANYNNAAPKVMYYSARGPDPEDSLPRESDILKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHVAGVAALIKQKFPNFSPAAIGSALSTTASLFDNNGKPIMAQRSYASPDLNQSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCGINGSAPTVLNYTGQNCWIYNSTVDGPDLNLPSITIEKLNQSRVVQRTVQNIAGNETYNVGWSSPYGVSVKVSPTRFSIANGERQVLSVIFNATSNSSVASFGRIGLFGNQGHVINIPVSVIVKISY* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01020 825 Pfam Fibronectin type-III domain 726 819 IPR041469 -
Rops2g01020 825 Pfam Subtilase family 157 643 IPR000209 GO:0006508|GO:0008236
Rops2g01020 825 ProSitePatterns Serine proteases, subtilase family, serine active site. 603 613 IPR023828 -
Rops2g01020 825 Gene3D - 697 821 - -
Rops2g01020 825 CDD Peptidases_S8_3 132 639 IPR034197 -
Rops2g01020 825 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Rops2g01020 825 FunFam Subtilisin-like protease SBT1.5 159 380 - -
Rops2g01020 825 ProSiteProfiles Serine proteases, subtilase domain profile. 137 680 - -
Rops2g01020 825 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 85 817 IPR045051 -
Rops2g01020 825 Pfam Peptidase inhibitor I9 19 132 IPR010259 -
Rops2g01020 825 SUPERFAMILY Subtilisin-like 132 684 IPR036852 GO:0004252|GO:0006508
Rops2g01020 825 Gene3D Peptidase S8/S53 domain 159 693 IPR036852 GO:0004252|GO:0006508
Rops2g01020 825 PRINTS Subtilisin serine protease family (S8) signature 602 618 IPR015500 -
Rops2g01020 825 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Rops2g01020 825 PRINTS Subtilisin serine protease family (S8) signature 237 250 IPR015500 -
Rops2g01020 825 Gene3D - 372 540 - -
Rops2g01020 825 CDD PA_subtilisin_like 381 513 - -
Rops2g01020 825 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 130 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01020 Rops-Chr2 14386873 14393837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01020 2 824 Subtilisin-like Serine Gene Family AT4G20430 70.012 0.0 1189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01020 - - gmx:100814065 1390.94