Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01004 ATGTTAGAGAGTGGTGCACGTGATTCTGAGTTGAGTTTGGAGACTCTGAATTCGACACAGCGAAGCTCCATGAGTAGTGAAAGCATGTGCAGCACAAGTTTCAGCCGTCTTTCCTTTGACTTACTGCCGGCATCGCCGGAGAGTCTCTCCGTGAAGCCTCACCGTTCCTCTGACTTTGCCTACTCCGCCATCCGCCGCAAGTCCGCACTTACCTTCCGTGACTTTCACCTCCTCCGCCGAATAGGCGCCGGCGACATCGGCACCGTATACCTCTGCCGCCTCCGTAAAACCAAAGACCAATTTGACAACGAAGAAGAAGACGCGTGTTTATTCGCCATGAAGGTGGTTGACAAAGATGCCGTTGCATTGAAGAAGAAGGCGCAGAGAGCTGAAATGGAGAGAAAGATTCTCAAGATGCTCGATCACCCTTTTCTTCCTACACTCTACGCTGAGTTCGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGAGACTTGCACTCCCTACGCCACAAACACTCTCATAACCGTTTTCCTCTCTCTTCCGCAAGATTTTATGCGGCTGAGGTGCTGGTGGCGTTGGAGTACCTTCACATGCTGGGAATCATTTACAGGGATCTAAAGCCTGAGAACGTGTTGGTCAGATCCGACGGTCACATCATGCTTTCTGATTTCGATCTTTCTCTTTGCTCAGACGCAATCCCAGCCGTTGAATCTTCAGATTGTTTATTTCCATCTGAATTACCTTACACTCGTTCGCGTTCTTTTCCCACTCCATTCTCCTGCTTTTCGAACCGGTTGTTCCGGTCACGCAAGGTCCAAACCCTTCAACCGAACCGGCTCTTCGTTGCCGAACCGGTTTCTGCCCGGTCCTGTTCCTTTGTTGGAACCCATGAGTACGTTTCGCCGGAAGTTGCCGCCGGCCGCTCTCATGGCAACGCCGTTGATTGGTGGTCCTTCGGGATTTTCATCTACGAACTTATATACGGTCGTACACCGTATGCGGCTCCATCGAACGAGGCTACGCTGCGCAACATATTAAAGAGGCCACTGACCTTTCCCACAGCCACGCCCTCGAGTGATCTTGAACTCCACGCGCGGGACCTGATATCCGGCTTGTTAAACAAGGATCCGGCTCAGCGGCTCGGCTCGAAGCGCGGCGCCGCTGACGTCAAGAAACACCATTTCTTCAAAGGGCTCAACTTGGCGCTGATTCGCATGTTGACGCCGCCCGAGGTGCCGGGCTCGAGAAGGCGAAAAACGACGTCGTTGTACCATGTGAAGGGTAACAGCAACAACAGAAGTAGACAGGAATCGACGGCGTCGTTTGGTTGTTACTTTTGA 1356 0.5192 MLESGARDSELSLETLNSTQRSSMSSESMCSTSFSRLSFDLLPASPESLSVKPHRSSDFAYSAIRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRKTKDQFDNEEEDACLFAMKVVDKDAVALKKKAQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHSHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDCLFPSELPYTRSRSFPTPFSCFSNRLFRSRKVQTLQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGRSHGNAVDWWSFGIFIYELIYGRTPYAAPSNEATLRNILKRPLTFPTATPSSDLELHARDLISGLLNKDPAQRLGSKRGAADVKKHHFFKGLNLALIRMLTPPEVPGSRRRKTTSLYHVKGNSNNRSRQESTASFGCYF* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01004 451 ProSiteProfiles Protein kinase domain profile. 75 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01004 451 Pfam Protein kinase domain 75 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01004 451 Pfam Protein kinase domain 295 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01004 451 Gene3D Transferase(Phosphotransferase) domain 1 169 419 - -
Rops2g01004 451 Coils Coil 113 140 - -
Rops2g01004 451 SMART serkin_6 75 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01004 451 Gene3D Phosphorylase Kinase; domain 1 75 427 - -
Rops2g01004 451 PANTHER FLIPPASE KINASE 1-RELATED 19 421 - -
Rops2g01004 451 SUPERFAMILY Protein kinase-like (PK-like) 55 419 IPR011009 -
Rops2g01004 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Rops2g01004 451 FunFam protein kinase PINOID 2 73 164 - -
Rops2g01004 451 MobiDBLite consensus disorder prediction 1 24 - -
Rops2g01004 451 FunFam protein kinase PINOID 165 233 - -
Rops2g01004 451 MobiDBLite consensus disorder prediction 417 451 - -
Rops2g01004 451 MobiDBLite consensus disorder prediction 10 24 - -
Rops2g01004 451 FunFam serine/threonine-protein kinase D6PK-like 293 419 - -
Rops2g01004 451 MobiDBLite consensus disorder prediction 429 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01004 Rops-Chr2 14124497 14125934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01004 8 438 AGC Kinase Gene Family AT2G34650 68.421 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops2g01004 Pkinase 3.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01004 - - gmx:100815648 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01004 2 14124497 14125934 Rops2g01004 2 14124497 14125934 ECH