Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00975 ATGTCGAAACCCCGGGGCAAGATCGGAGCATGGGCCGCGGAATCCGAGCGCGCCGAAGCGGAGGAGCGCGAAGCCGCCGCCGCTGCCGGCGAGTCGCAAAGCTTCCCCAGCCTCAAGGAAGCTGTGAACTCCAAGCCCAAGAAGAACAAGAAGATGTCGCTTTCTGAGTTCACCAATAGCAGTTACGCCTCCGGCGGTGGGTTCGCCCGCGAGAAGCAGGGTCTGACGCCGGACGAGATGCTTCGTCTTCCCACCGGTCCCAAAGAACGTTCCGCTGATGAAATGCAGTTCAGCCGTTACGGCGGAGGGTTCTCCTCGTTCGACCGTTCCGGTCCTCAGATGGGACGCCGGGAGCGAGATGGAGGCAGCGGCGACGGTTCTTGGGGCGGAGGGAGAAGATCCTTTGGCGGATTTGACGATGAACGTAGGGGTTCGAATTCTAGGGTTTCGGAACTCGATCAACCGTCGAGGGCTGACGAGGTCGATAATTGGGCGTCGGTTAAGAAACCTCTCCCGGCGTTCGATTCCGGCCGGCAGAACCGTTACGGTGGCAGTTTTGGCGGCTCGTCGAGGGCCGATGGGGTGGATAATTGGACGGCTGGTAAGAAACCCGTTTCTGGTGGATCCTCTGGCGTGGAACCAGATCGGTGGTCGAGGGGAGCGCCGCGTGAGATGGAACGACCGAGGTTAGTGTTGGATCCACCAACGAGAAATGAAGGTTCTGTGACGAATAAGCCGAATCCGTTTGGTGCTGCGAGGCCAAGGGAAGAGGTGTTGGCTGAGAAGGGATTAGATTGGAAGAAGCTTGATTCTGAGATTGAAGCGAAGAAGCCGCTGAGTAGACCCAATAGTTCTCATTCTAGCAGGCCTTCCAGTGCTCACTCTCAACGTTCTGAGGGTCCAGAAGCTTCTGTGCCGAAACCGAGACCTAAGGTGAACCCATTTGGAGATGCCAAACCTAGGGAGGTTTTGCTCAATGAGAGAGGCATGGATTGGAAGAAGATTGATCTTGAATTGGAGCATCGTGGTGTTGACAGGCCTGAGACAGAGGAGGAAAAAATATTAAAAGAAGAAATTGAGAATTTAAAGAAGGAACTTGAGAAAGAGTCTACAATGAATTCAAATAAGGAAACTTCGGATGAGGCTGGTGGAAACCAAACCAGTACACATGCAATGTTACTACAAAAAGAAAGAGAGCTGGAACAACTTATCCGTGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCATCGGCAGGAAAGACTACTGGTTTTTCTGATAGGCCACCATCTCGATCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTACAGACCGGCCTCGATCCCGTGGCACAGGAGATGCGTGGACGCGTCCTAGTGATGACAGAAGACAATTTCAAGGTGGCAGGGATAGGGGATGGTTTTCGAACAACAGAGACTTAAATAGGTCAAGGTCAAGAGAAAGATGGTGA 1494 0.5274 MSKPRGKIGAWAAESERAEAEEREAAAAAGESQSFPSLKEAVNSKPKKNKKMSLSEFTNSSYASGGGFAREKQGLTPDEMLRLPTGPKERSADEMQFSRYGGGFSSFDRSGPQMGRRERDGGSGDGSWGGGRRSFGGFDDERRGSNSRVSELDQPSRADEVDNWASVKKPLPAFDSGRQNRYGGSFGGSSRADGVDNWTAGKKPVSGGSSGVEPDRWSRGAPREMERPRLVLDPPTRNEGSVTNKPNPFGAARPREEVLAEKGLDWKKLDSEIEAKKPLSRPNSSHSSRPSSAHSQRSEGPEASVPKPRPKVNPFGDAKPREVLLNERGMDWKKIDLELEHRGVDRPETEEEKILKEEIENLKKELEKESTMNSNKETSDEAGGNQTSTHAMLLQKERELEQLIRDLDDKVRFGQKAVERPGSSAGKTTGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDAWTRPSDDRRQFQGGRDRGWFSNNRDLNRSRSRERW* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00975 497 MobiDBLite consensus disorder prediction 1 325 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 255 279 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 376 393 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 135 164 - -
Rops2g00975 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 496 IPR010433 GO:0003743
Rops2g00975 497 MobiDBLite consensus disorder prediction 483 497 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 217 233 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 10 26 - -
Rops2g00975 497 Coils Coil 390 410 - -
Rops2g00975 497 Pfam Plant specific eukaryotic initiation factor 4B 1 480 IPR010433 GO:0003743
Rops2g00975 497 Coils Coil 349 379 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 445 476 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 425 444 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 280 299 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 414 497 - -
Rops2g00975 497 MobiDBLite consensus disorder prediction 363 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00975 Rops-Chr2 13680571 13687836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00975 8 497 Eukaryotic Initiation Factors Gene Family AT3G26400 54.206 3.20e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00975 - - gmx:100784238 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00975 2 13680571 13687836 Rops2g00975 2 13680571 13687836 ECH