Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00966 ATGGGAAGAACCAAAGTTTCCACCCTCTCCTCTGCTAATAACCACTACATGCTTCCTCTTTCCAACACCATAAACCGAACTCTTTTAAACAAACCAAATACACAGAAAGATCGATTCCCCTCATCGCTCTTAGGATTATTGCGTCGCCTCATCTATGGAAGGAAAGTTGATGGGGGCTCACGAACTGAGGAAGAAGAGAAAGTCTACTCTTGGTTATACACCTTGGCCCAGTCTGAGAAAAACTTGGTCTTCGAGTATGTTAGGTCCACAGAAAGAGGCTTAAGTTTCACTGAAGCTGAGAGGAGGCTGCGAGAAAATGGCCCAAATGTGCCACTTGAGTATTCTTTTCCAAGATGGTGGCATCTTCTATGGAACGCTCTTTTCCATCCTTTCAATATGATTCTGATTGTTTTATCTGCCTTGTCATTCATTGCCCGTGACAATCCAAATGGATGTATCATGTTCATATTGGTTTTCATCAGTGTTACCCTCCGTTTCTGTCAGGAATACAGCAGCTCAAAAGCAGCAATGAAGCTTTCAGAATTTGTAAGATGCCCAATAAAAGTTCAAAGATGTGCTGGTAGAGTTGTGCAGACAGAATTAATAGTTCAAGTTGATCATAGGGATGTGGTTCCAGGTGACATTGTGATTTTTGAACCTGGGGACCTTTTTCCTGGAGATGTCAGGTTGTTATCTTCAAAACATCTTGTTGTAAGCCAGGCCTCACTAACTGGAGAATCTTGGACAACTGATAAAACTGCTGATGTCAGAGAAGATCACACCACTCCTTTATTAGATTTAAAGAATATATGCTTTATGGGAACAAACGTCGTATCAGGTACTGGAACAGGCTTAGTTATTTCAACAGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAACAAGCCACCAGATGACTTCGAAAAGGGTCTAAGATGGATATTTTACTTGCTTGTTTCTGTTATGCTAGTAGTTGTTACAGTCGTGTTTGTGACAGATTACACTACATCCCTTAATTGGAGCGAAAGTATTCTTTTTGCAACCTCAGTGGCATCAGCCCTCAATCCTCAGATGCTACCACTCATCATTAACACATGCCTTGCAAAAGGAGCACTTGCTATGGCTAGAGACAGCTGTATAGTAAAAAGTTTAACAGCTATACGTGAGATGGGATCGATGGATATCCTTTGTATTGACAAGACAGGCACCCTAACAATGAATCATGCAATCATGGTTAATTACCTTGACTGCAGGGGTTTACCCCAAGAAAAAGTTCTACGCTATGCCTTCCTCAATTCTTACTTTAAGAGTGATCAGAAGTATCCTCTGGATGACGCAATTCTGGCATTTGTATATTCAAATGGATTCAGGTTTCAACCATCCAAGTGGAGGAAGACAGATGAGATTCCTTTTGACTTCATAAGAAGAAGGGTATCTGTCATCTTAGAAACAGAAGATAGACACTCTCAGTTCTTTGGCAGGTACATGGTAACAAAAGGAGCATTGTTGGAAGTCATGAGAGTTTGTTCTTTTATTGAGAATTTCGATAAAGATGAAATTTCCACATTCTCTTCAGATGACTATCAGAGAATTTTAAATCTGTCAGAAGAATTGAGCAATGAAGGGTTAAGGGTCATAGCAGTAGCTATAAGGAAGCTGGAAATGCGGCAAACGTGTGAAACAAGTAATGGAAGCAAGAGAGGTGAGGAGGATCTTGAAAGAGACATGATGTTCCTTGGCCTCATAACATTTTTTGACCCACCAAAGGACTCAGCAAAGCAAGCATTGTGGCGTTTGGCAGAGAAGGGAGTGAAAGCAAAGGTTTTAACAGGTGACTCACTCTCCTTGACAACAAGGATATGCAGGGAAGTTGGCATAAGGACCACTCATGTAATAACAGGACCTGAGCTAGAGCAACTTGACCAAGAAACTTTCCATGAAACAGTTAAAAGAGCCACAGTGCTAGCACGTCTAACACCAACTCAGAAACTCCGAGTGGTGCAATCTTTGCAGACAATAGGAAACCATGTTGTTGGATTCTTGGGAGATGGAGTGAATGATTCACTGGCTCTAGAAGCTGCCCATGTAAGCATTTCTGTGGATTCAGGGGTAGCCATAGCAAAAGACATGGCAGATATTATCTTACTTGAGAAAGATCTCAACGTGCTTGTTGCAGGAGTGGAGCATGGAAGACTCACCTTTGGCAACACAATGAAGTATGTAAAGATGTCAGTTATTGCTAACTTGGGAAGTGTGATTTCACTCCTCATAGCATCACTGGTCCTCAAGTATGAGCCCTTGACTTCTAGACAACTTGTTACCCAGAATTTCATTTACAGTGTGGGACAGATTGCCATCCCTTGGGACAAGATGGATGAAGAGTATGTGAAGACTCCTCAGAAGTGGTCAGAGAGAGGCTTACCCATGTTCATATTGTGGAATGGGCCAGTTTGCACTCTTTGTGATGTGGCAACACTTTTGTTTCTTTGGTTCTATTACAAGACTTATACTGATGTGGATGAGAAATTTTTCCATACAGCTTGGTTCATTGAGGGTCTTCTCATGCAGACCCTCATTATCCACTTGATCAGGACAGAGAAAATCCCTTTCATACAGGATATTGCCTCTTGGCCTGTGATGTGCTCTTCTCTTGTGGTATCTGCAATTGGAATCGCATTTCCCTTCACACCCATTGGGAAGGTCATGGGATTCATCCTTCTACCCCTCTCATATTTAGGATTTATGGTTGTTCTTTTTCTGGGATACTTTACAGTTGGCCAGGTGGTTAAGAGAATTTACATATCAGTTTATAAGAGATGGCTATGA 2838 0.4154 MGRTKVSTLSSANNHYMLPLSNTINRTLLNKPNTQKDRFPSSLLGLLRRLIYGRKVDGGSRTEEEEKVYSWLYTLAQSEKNLVFEYVRSTERGLSFTEAERRLRENGPNVPLEYSFPRWWHLLWNALFHPFNMILIVLSALSFIARDNPNGCIMFILVFISVTLRFCQEYSSSKAAMKLSEFVRCPIKVQRCAGRVVQTELIVQVDHRDVVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESWTTDKTADVREDHTTPLLDLKNICFMGTNVVSGTGTGLVISTGSNTYMSTMFSKVGKNKPPDDFEKGLRWIFYLLVSVMLVVVTVVFVTDYTTSLNWSESILFATSVASALNPQMLPLIINTCLAKGALAMARDSCIVKSLTAIREMGSMDILCIDKTGTLTMNHAIMVNYLDCRGLPQEKVLRYAFLNSYFKSDQKYPLDDAILAFVYSNGFRFQPSKWRKTDEIPFDFIRRRVSVILETEDRHSQFFGRYMVTKGALLEVMRVCSFIENFDKDEISTFSSDDYQRILNLSEELSNEGLRVIAVAIRKLEMRQTCETSNGSKRGEEDLERDMMFLGLITFFDPPKDSAKQALWRLAEKGVKAKVLTGDSLSLTTRICREVGIRTTHVITGPELEQLDQETFHETVKRATVLARLTPTQKLRVVQSLQTIGNHVVGFLGDGVNDSLALEAAHVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGSVISLLIASLVLKYEPLTSRQLVTQNFIYSVGQIAIPWDKMDEEYVKTPQKWSERGLPMFILWNGPVCTLCDVATLLFLWFYYKTYTDVDEKFFHTAWFIEGLLMQTLIIHLIRTEKIPFIQDIASWPVMCSSLVVSAIGIAFPFTPIGKVMGFILLPLSYLGFMVVLFLGYFTVGQVVKRIYISVYKRWL* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00966 945 Pfam haloacid dehalogenase-like hydrolase 397 698 - -
Rops2g00966 945 SUPERFAMILY Calcium ATPase, transmembrane domain M 89 942 IPR023298 -
Rops2g00966 945 SFLD Haloacid Dehalogenase 383 735 - -
Rops2g00966 945 SUPERFAMILY HAD-like 397 735 IPR036412 -
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 761 772 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 743 758 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 793 806 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 813 829 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 331 350 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 435 448 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 314 330 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 848 869 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 PRINTS Magnesium-transporting ATPase signature 898 919 IPR006415 GO:0015444|GO:0015693|GO:0016020
Rops2g00966 945 ProSitePatterns E1-E2 ATPases phosphorylation site. 403 409 IPR018303 -
Rops2g00966 945 Pfam Cation transporter/ATPase, N-terminus 85 142 IPR004014 -
Rops2g00966 945 SMART Cation_ATPase_N_a_2 74 147 IPR004014 -
Rops2g00966 945 SUPERFAMILY Calcium ATPase, transduction domain A 195 300 IPR008250 -
Rops2g00966 945 Gene3D - 185 289 - -
Rops2g00966 945 NCBIfam HAD-IC family P-type ATPase 154 445 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00966 945 NCBIfam HAD-IC family P-type ATPase 647 765 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00966 945 Gene3D - 398 722 IPR023214 -
Rops2g00966 945 Gene3D - 413 589 IPR023299 GO:0000166
Rops2g00966 945 Gene3D - 151 896 - -
Rops2g00966 945 SFLD p-type atpase 383 735 IPR044492 -
Rops2g00966 945 Pfam E1-E2 ATPase 195 380 - -
Rops2g00966 945 PANTHER CATION TRANSPORTING ATPASE 80 937 - -
Rops2g00966 945 NCBIfam magnesium-translocating P-type ATPase 66 944 IPR006415 GO:0015444|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00966 Rops-Chr2 13583995 13589936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00966 92 837 Primary Pumps ATPases(2) AT1G10130 26.031 9.44e-63 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00966 K01531 - gmx:100795153 1612.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00966 2 13583995 13589936 Rops2g00966 2 13583995 13589936 ECH