Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00959 ATGGAACGATATGAGATAATCAAAGATATTGGGTCAGGGAACTTTGGTGTGGCAAAGCTGGTAAGGGAGAAATGGAGTGGTGAGTTGTACGCTTGCAAGTTTATTGAGAGAGGCTTCAAGATTGATGAGCACGTGCAAAGGGAGATTATAAATCATAGGTCCTTAAAGCATCCCAATATTGTTAGATTTAAAGAGGTGTTGCTTACTCCAACTCATCTAGCAATAGTCATGGAATATGCTGCCGGGGGAGAACTATTTGAAAGAATATGCAGTGCTGGGAGATTCAGTGAGGACGAGGCAAGATATTTCTTCCAGCAATTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTTTAGATGGAAGCTCAGCACCAAGACTCAAAATCTGTGACTTTGGTTACTCAAAGTCATCTGTTCTGCACTCCCAGCCAAAATCTACTGTAGGAACCCCTGCATATATTGCCCCAGAAGTCTTGTCAAGAAGAGAATATGATGGAAAAGTTGCAGATGTATGGTCTTGTGGGGTGACTTTATATGTGATGCTAGTTGGAGCTTATCCTTTTGAAGACCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGCGAATTCTTAGCGTCCACTATTCTATTCCAGCCTATGTTCGTATCACTAAAGAGTGCAGGCATCTTTTATCTCGAATATTTGTGGCCAACCCTGAGAAGAGAATAACCATACCAGAGATTAAAATGCATCCATGGTTCCTAAAGAACTTGCCACTAGAATTTATGGATGAGGGTGAAGGTGGTGGGTTGCAAAATGATGCTAATGATGATTCATCTCAGAGCATTGAAGAAATATTGTCCATAATTCAAGAGGCTAGGAAACCCGGTGAGGGCTCAAAAGTTGGTGAGCAATTTGTTGGGGGCAGCATGGATCTTGATGATTTGGATGCAGATGCTGACATCGATGATATTGAAACAAGCGGTGATTTTGTCTGTGCATTGGAATCAAACAAAAGCTGTATTTCAGTGGGTTTTGATTTGATTTTCCTTCGATTGGAAGTTACTGCTTGTCTTGATCTCTATTGCTTAAATGTGAATTAA 1122 0.4073 MERYEIIKDIGSGNFGVAKLVREKWSGELYACKFIERGFKIDEHVQREIINHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPAYVRITKECRHLLSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDEGEGGGLQNDANDDSSQSIEEILSIIQEARKPGEGSKVGEQFVGGSMDLDDLDADADIDDIETSGDFVCALESNKSCISVGFDLIFLRLEVTACLDLYCLNVN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00959 373 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00959 373 PANTHER SERINE/THREONINE KINASE 2 283 - -
Rops2g00959 373 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00959 373 SUPERFAMILY Protein kinase-like (PK-like) 2 265 IPR011009 -
Rops2g00959 373 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Rops2g00959 373 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Rops2g00959 373 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Rops2g00959 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Rops2g00959 373 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Rops2g00959 373 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00959 373 CDD STKc_SnRK2 3 259 - -
Rops2g00959 373 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00959 Rops-Chr2 13398639 13401539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00959 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 44.043 2.38e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops2g00959 Pkinase 1.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00959 K14498 - gmx:100807981 631.328