Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00950 ATGCCAGTAGAAATGGACTTCATGTTTGTGCTATTGCTGTTGTTGGGTTGCCTATTTTCTTTTGTGTTGCCTGATGAGCAAGGAGATGCCCTATTTGCATTGAAAATGTCATTGAATGCTTCAAGTAACCAGCTTACGGACTGGAATCAAAATCAAGTGAACCCTTGTACTTGGTCACGTGTTTACTGTGACCAGAACTACAATGTCGTCCAAGTTTCACTAGCGATGATGGGATTCACAGGATACTTGACCCCAAGAATAGGAGCTCTAAAACATCTTGCAACTCTTTCTTTACAGGGGAATGGCATCACTGGTGATATACCAAAAGAGATAGGAAATCTGACAAGCTTGGTCAGGTTGGATTTAGAAAACAACAGATTAACTGGTGAAATACCGTCTTCCTTTGGTAATCTTAAAAGCCTTCAATTCTTGACATTGAGTCAAAACAATCTCGATGGGACTATACCTGGATCACTTGCCAGTCTCCCAAGCTTGATAAATGTTCTACTAGATTCAAATAATCTTAGTGGCCGAATTCCGGAGCATTTATTTGAACTTCCTAAATACAATTTCACTGGAAACAAGTTGAATTGTGGTGTGAATTATCTTCGACCTTGCGCATCTAATAATGCAGATCAAGGTTCATCACATAAACCAAAAATTGGCCTCATAGTTGGAATTATTGTAGGGTTAGTTGTTATCCTTTTTCTTGGTGGTCTGCTGTTCTTTTGGTGCAAGGGTAGACACAAGGGCTACAAGCGTGAAGTTTTTGTAGATGTTGCAGGTGAAGTTGATCGGCGAATTGCATTTGGTCAACTAAAAAGATTTTCATGGAGAGAACTACAGATAGCTACAGACAACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTGTTCTTGCTGATAACACAAAAGTTGCTGTCAAAAGGCTAACTGATTATGAAAGCCCTGGGGGAGATGCAGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTGCATAGGAACCTGTTGCGGTTGATTGGGTTTTGTACTACTCCAACTGAGCGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTATCAATTACGAGAACTCAAACCTTGGGAACCTGTTTTGGATTGGCCTACAAGAAAACGAGTGGCTCTGGGAACAGCCCAGGAAGATGATGTGCTATTGCTTGACCATGTCAAGAAATTAGAACGGGAGAAAAGACTAGAGGCTATTGTTGACCGCAACCTAAATAAAAATTACAACATGCAAGAGGTAGAAATGATGATACAAGTTGCATTACTCTGCACACAAGCAACGCCAGAGGACCGTCCATTGATGTCAGAGGTTGTAAGAATGCTAGAAGGAGAGGGGTTGGCTGAAAGGTGGGAAGAATGGCAGCATGTGGAGGTCAATCGGAGGCAAGAGTATGAGAGATTACAAAGAAGATTTGACTGGGGAGAAGATTCAGTTTATAATCAAGATGCCATCGAGTTGTCTGGTTGGTGTACTGCAAGTCCTCAAACAATGATCGTTGTACATAAAGGTTGGATGCTGTCTGTGAATCACAAAATCTGCCTGGGACCTGCGAAGCTCGACAAAAGATACAAAGTGGTGTGA 1644 0.4161 MPVEMDFMFVLLLLLGCLFSFVLPDEQGDALFALKMSLNASSNQLTDWNQNQVNPCTWSRVYCDQNYNVVQVSLAMMGFTGYLTPRIGALKHLATLSLQGNGITGDIPKEIGNLTSLVRLDLENNRLTGEIPSSFGNLKSLQFLTLSQNNLDGTIPGSLASLPSLINVLLDSNNLSGRIPEHLFELPKYNFTGNKLNCGVNYLRPCASNNADQGSSHKPKIGLIVGIIVGLVVILFLGGLLFFWCKGRHKGYKREVFVDVAGEVDRRIAFGQLKRFSWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYQLRELKPWEPVLDWPTRKRVALGTAQEDDVLLLDHVKKLEREKRLEAIVDRNLNKNYNMQEVEMMIQVALLCTQATPEDRPLMSEVVRMLEGEGLAERWEEWQHVEVNRRQEYERLQRRFDWGEDSVYNQDAIELSGWCTASPQTMIVVHKGWMLSVNHKICLGPAKLDKRYKVV* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00950 547 CDD TM_EGFR-like 219 253 - -
Rops2g00950 547 ProSiteProfiles Protein kinase domain profile. 288 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00950 547 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Rops2g00950 547 SUPERFAMILY Protein kinase-like (PK-like) 268 397 IPR011009 -
Rops2g00950 547 SUPERFAMILY L domain-like 27 196 - -
Rops2g00950 547 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Rops2g00950 547 Gene3D Transferase(Phosphotransferase) domain 1 375 482 - -
Rops2g00950 547 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 412 473 - -
Rops2g00950 547 FunFam Somatic embryogenesis receptor kinase 1 257 364 - -
Rops2g00950 547 Pfam Protein tyrosine and serine/threonine kinase 291 401 IPR001245 GO:0004672|GO:0006468
Rops2g00950 547 FunFam Protein NSP-INTERACTING KINASE 2 396 482 - -
Rops2g00950 547 Gene3D Phosphorylase Kinase; domain 1 257 364 - -
Rops2g00950 547 Gene3D Ribonuclease Inhibitor 24 221 IPR032675 -
Rops2g00950 547 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Rops2g00950 547 FunFam Putative LRR receptor-like serine/threonine-protein kinase 24 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00950 Rops-Chr2 13251558 13260883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00950 398 509 Receptor kinase-like Gene Family AT5G10290 83.929 4.77e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Rops2g00950 PK_Tyr_Ser-Thr 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00950 - - gmx:100793416 676.396