Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00908 ATGCAGGGAACAACAGAGTTCTCCCAAACACTTCAATCAAATATGGCTTTACCAGCCATTGAGACATGCCAAGTAGGGGATATAGTGGTGGTGGACACTGAGAAGATCACTCAACAACAACATTATGAAAAGTCTCAGTGGGTGCTCAATGCTCCTGATCCCCCAACTCCATGGCATGAACTCATGGATTCTATGAGAAACACCATTTCACACTACCAACAAAGGTGCTCTTCTCTCAGAGGCCAAACAGGACCCAAAGTTGTGCTTTGCTTCTTGAGGGGCATTTTTCCTATTCTTGATTGGGGCCAAAATTATACTGCAACCAAATTCAGGAATGATTTACTTGCAGGTCTAACCGTTGCAAGTCTCTGTATTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGCCTCTATACAAGTGTGGTGCCACCTCTTATCTACGCTTTAATGGGAACTTCAAGAGAAATAGCAATTGGACCCGTGGCCGTGGTTTCGCTTCTTTTGTCATCAATGATTCAGAAATTAATAGACCCTGCTACTGATCCAATTGGTTACAGAAAGCTTGTTTTCACTGCCACCTTCTTTGCTGGTATATTTCAAACTGCTTTTGGACTCTTCAGGTTGGGGTTCTTAGTGGATTTTCTCTCCCATGCTGCTATTGTGGGATTCATGGCGGGAGCAGCTATGATAATTGGTCTTCAACAGCTGAAGGGACTGTTTGGGATCAATCATTTTACGGATAAAACAGACATAATCTCTGTGATGATGTCAGTTTGTGAATCAGTTCATCATCCCTGGAACCCCCGCAATTTTGTCCTGGGATGTTCATTCTTCATTTTCATCTTATTTACCAGATATCTGGGTAAAAGGAATAAAAAACTGTTCTGGCTGCCAGCAATATCCCCTCTAGTGTCAGTTGTATTATCAACCCTTATTGTTTTTCTGACACGAGCTGACAAAAGTGGAGTTAATATTATCAAACATATAGAAGGAGGATTGAACCCAAGCTCTGTCAATCAGATAGAGTTTACTAGCCCCCATGTTGGGGCTTTGGCCAAAATTGGACTAGTTGCTGCTGCTGTTGCACTCACCGAATCAGTTGCCGTTGGCCGATCTTTTGCATCCATGAAAGGATACCATCTTAATGGAAACAAGGAAATGGTGTCATTAGGCTTCATGAACATCATAGGAAGCTTCACCTCTTGCTATGTTGCAACTGGTTCTTTCTCCCGCACGGTGGTAAATTTCACTGCTGGTTGTGAAACATTAGCATCAAACATTGTGATGGCCATTACAGTCTTCATATCACTGCAATGTTTCACGAAACTGCTGTATTTTACCCCAACTGCAATTCTTGCTTCAATAATCCTTTCAGCTCTCCCTGGACTAATAGACATTAATGAAGCTTACAAAATATGGAAGGTTGATAAGCTTGATTTTCTTGCTTGCATTGGAGCCTTCTTTGGTGTGCTGTTTGTGTCAGCGGAAATTGGTCTTCTAGTGGCGGTGGCGATATCTTTTACAAAGATAATTTTGATCTCTACTGGACCTGGCACAGAAACTCTGGGAAGACTTCCAGGCACAGATGTATTCTGCGATGTCCATCAGTATCCTATGGCTGTTGAGACTCCCGGGGTTGTAATAATACGAGTCAAGTCTGCATTGCTTTGCTTTTCTAATGCCAATTTAGTCAGAGAAAGGATCCTGAAATGGATCACTCAGGAAGAAGCAGAGGGGAACAAGGAAGACACCAGAAACATAATTCAGCTCGTAATCCTTGACACCTCCAATTTGGTGAGCATTGACACCTCAGGAATTGCTTCTCTAGAGGAACTGCATAAGAGTTTGGTCTCAAGTGGGAAACAGTTAGCAATTGCCAGTCCTAGGTGGCAAGTGATTTACAAGCTAAAGTTGTCCAACTTAGTCAAAACAATTGGAGGACGAGTGTTCTTGACTGTTGGAGAAGCTATTGACTGCAAGCTGGATTTCTAA 2010 0.4259 MQGTTEFSQTLQSNMALPAIETCQVGDIVVVDTEKITQQQHYEKSQWVLNAPDPPTPWHELMDSMRNTISHYQQRCSSLRGQTGPKVVLCFLRGIFPILDWGQNYTATKFRNDLLAGLTVASLCIPQSIGYATLAKLDPEYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLLSSMIQKLIDPATDPIGYRKLVFTATFFAGIFQTAFGLFRLGFLVDFLSHAAIVGFMAGAAMIIGLQQLKGLFGINHFTDKTDIISVMMSVCESVHHPWNPRNFVLGCSFFIFILFTRYLGKRNKKLFWLPAISPLVSVVLSTLIVFLTRADKSGVNIIKHIEGGLNPSSVNQIEFTSPHVGALAKIGLVAAAVALTESVAVGRSFASMKGYHLNGNKEMVSLGFMNIIGSFTSCYVATGSFSRTVVNFTAGCETLASNIVMAITVFISLQCFTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACIGAFFGVLFVSAEIGLLVAVAISFTKIILISTGPGTETLGRLPGTDVFCDVHQYPMAVETPGVVIIRVKSALLCFSNANLVRERILKWITQEEAEGNKEDTRNIIQLVILDTSNLVSIDTSGIASLEELHKSLVSSGKQLAIASPRWQVIYKLKLSNLVKTIGGRVFLTVGEAIDCKLDF* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00908 669 CDD STAS_SulP_like_sulfate_transporter 543 657 - -
Rops2g00908 669 ProSiteProfiles STAS domain profile. 562 666 IPR002645 -
Rops2g00908 669 NCBIfam sulfate permease 97 655 IPR001902 GO:0016020|GO:0055085
Rops2g00908 669 PANTHER SULFATE TRANSPORTER 70 664 IPR001902 GO:0016020|GO:0055085
Rops2g00908 669 Pfam STAS domain 543 662 IPR002645 -
Rops2g00908 669 Gene3D STAS domain 522 666 IPR036513 -
Rops2g00908 669 SUPERFAMILY SpoIIaa-like 547 664 IPR036513 -
Rops2g00908 669 ProSitePatterns SLC26A transporters signature. 139 160 IPR018045 GO:0008271|GO:0008272
Rops2g00908 669 FunFam Sulfate transporter 31 522 668 - -
Rops2g00908 669 Pfam Sulfate permease family 110 490 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00908 Rops-Chr2 12760591 12768178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00908 39 665 Inorganic Solute Cotransporters AT5G10180 66.401 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00908 K17469 - gmx:100775538 1107.43