Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00893 ATGTCGTGTGCCCATCACTGGCGCAGAGCTCAGGTTCAGATCGACCTCGTCAACACCGTCTTCGGGGTGGTGCCGCCGAGTGTTCCAATGCCCTCTTCCTTCGACCTATCTAATTATGGGTTCGTTTGTCGCAAATCCACTAGAGGAGGGAAGAATACTACTAATGTGTGTTGCACTAAAGATCCCAAGTTCAAAACAAACATTACTACAGATGAAGAGTTTCTGCCACAACAAAATGGGGATCTTACTATTATTTATGATGTGATAAGAACTTATGACTCTAATTACTGGGCTGAGGTTACTATTGCAAATCATAACCTACTCGGTCGTCTTGATAATTGGAGGTTGAGCTGGGATTGGATGAATGATGAGTTTATTTATTCAATGAAAGGGGGTTATCCATCTGTTGTGGATGCTTCGAATTGTATCTTTGGTAAGTAG 441 0.4263 MSCAHHWRRAQVQIDLVNTVFGVVPPSVPMPSSFDLSNYGFVCRKSTRGGKNTTNVCCTKDPKFKTNITTDEEFLPQQNGDLTIIYDVIRTYDSNYWAEVTIANHNLLGRLDNWRLSWDWMNDEFIYSMKGGYPSVVDASNCIFGK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00893 146 PANTHER COBRA-LIKE PROTEIN 7 3 146 - -
Rops2g00893 146 Pfam COBRA-like protein 96 142 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00893 Rops-Chr2 12540703 12542349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00893 9 145 COBRA Gene Family AT4G16120 55.474 8.80e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00893 - - gmx:100803929 239.58