Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00879 ATGATTTGGATAGCAATTTTCTTAGCTTCTCTTACATATCTCTGGCTATGGAGAAGCAAGAAGAAAGCTAATAGATTACCTCCAGGTCCAAGAGGGTTGCCAATTTTGGGGTGCCTTCACTTGTTGGGGGCAAATCCTCATCGTGATCTGCATAAACTAGCTCAAAAACATGGACCTATCATGCACTTGCGCTTGGGTTTTGTGCCCACCATAGTTGTTTCTTCACCCCAAGCTGTTGAGCTGTTCCTAAAGACCCATGATCTTGTCTTTGCCAGTAGACCACCTCAGGAGGCTGCAAAGTACATCTCTTGGGATCAGAGGAGCATAAGCTTTGCCGAATATGGTTCTTATTGGCGCAACATGAGGAAGATATGCACATTGAAATTGCTGAGCCATACCAAAATTAACTCCTTCGGACGTATGAGGGAAGAGGAGCTCGACCTATTGATCAAGCTTCTAAGAAAGGCATCCAATGATGGAGCTGCTATTGATATCAGCACCAAGGTGGCAACACTCAGTTCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTACATGGACCAGGACTTGGATCAGAAGGGATTCGAGGCTGTTACGCAAGAGACAAATTATTTAGTAGCAGTTCCCAACATGGGTGATTACATTCCTTATATTGGAGCCCTTGACCTTAAAGGACTAACTAAGCGCATGAAAGCAGTGGGCAAAATCTTTGACGACTTCTTTGAGAAAATTATTGATGAGCATATACAATCAGAGAACAGAGAAGACAAGATCAAGGATTTCGTGGACGTCATGTTGAGCTTTGTTGGTACTGAGGAATCCGAATACCGTATTGAACGGCCCAATATCAAAGCCATAATGCTGGATATGCTGGGAGGTTCAACGGATACTTCTGCTGCAGCCATAGAGTGGACAATTTCAGAGCTCCTCAAGCATCCAAGGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAGTCAGACTTGGACAAGTTGGAGTATCTGGACATGGTTATAAAGGAAAGCTTTAGGATCCATCCCGTGGCACCATTACTAATACCACATCATTGTTTGGAAGATTGCATGGTTGGAGGTTTTTTCATACCTAAAAACTCCAGGGTCATAGTAAATGCATGGGCAATTATGAGAGACCCAAATGCTTGGAGTGACCCAGAGAAGTTCTGGCCGGAGAGATTTGAGGGAAGCAAAATAGATGTCCGAGGGCGTGACTTCCAACTCATACCATTTGGTTCTGGCAGAAGGGGTTGTCCTGGATTGCAATTGGGCCTAACTGTGGTTCGATTAGTGGTAGCGCAACTTGTGCATTGCTTTGATTGGAAGCTACCAAATGACATGTTGCCAACTGAGTTGGACATGACTGAGGAGTTCGGCATCACAATGCCCAGGGCCAACCATCTAGTTGCCATTCCTACTTATCGTCTTCACAATGAAAGCTGCAACTCCACCCCATATTTCAGCTGA 1512 0.4484 MIWIAIFLASLTYLWLWRSKKKANRLPPGPRGLPILGCLHLLGANPHRDLHKLAQKHGPIMHLRLGFVPTIVVSSPQAVELFLKTHDLVFASRPPQEAAKYISWDQRSISFAEYGSYWRNMRKICTLKLLSHTKINSFGRMREEELDLLIKLLRKASNDGAAIDISTKVATLSSDMSCRMVLGKKYMDQDLDQKGFEAVTQETNYLVAVPNMGDYIPYIGALDLKGLTKRMKAVGKIFDDFFEKIIDEHIQSENREDKIKDFVDVMLSFVGTEESEYRIERPNIKAIMLDMLGGSTDTSAAAIEWTISELLKHPRVMKKVQMELETVVGMKRKVEESDLDKLEYLDMVIKESFRIHPVAPLLIPHHCLEDCMVGGFFIPKNSRVIVNAWAIMRDPNAWSDPEKFWPERFEGSKIDVRGRDFQLIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNDMLPTELDMTEEFGITMPRANHLVAIPTYRLHNESCNSTPYFS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00879 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Rops2g00879 503 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PANTHER CYTOCHROME P450 93A3-LIKE 3 492 - -
Rops2g00879 503 CDD CYP71-like 56 483 - -
Rops2g00879 503 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 Gene3D Cytochrome P450 16 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 Pfam Cytochrome P450 27 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00879 503 FunFam Cytochrome P450 83B1 14 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00879 Rops-Chr2 12417770 12419975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00879 2 491 Cytochrome P450 AT5G07990 40.755 5.78e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00879 K20562 - gmx:100809526 839.336