Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00875 ATGATTTGGTTAGCAATTTTTTTAGCTTCTCTTACTTGTCTATGGCTATGGAGAAGCAGAAAGAAGGCAAAGAGATTACCTCCTGGTCCAAGAGGGTTGCCAATTCTGGGGTGCCTTCACATGTTGGGGGCAAATCCTCATCGTGATCTGCACCAACTAGCTCAAAAACATGGACCTATCATGTACTTGCACATGGGTTTTGTGCCCACCATAGTTGTTTCTTCACCCCAAGCTGCTGAGCTGTTCCTCAAGACTCATGACCTTGCCTTTGCTAGTAGACCACTTCTTGAGGCTGAAAAGTACATCTCTTGGGATCATAGGAGCATGAGCTTTGCTGAATATGGTTCTTATTGGCGTAACATGCGTAAGATGTGCACGTTGGAAATGCTAAGCCATACCAAAATTAGCTCCTTCAGACGCCTGAGGGAAGAGGAGCTTGACCTATTGATCAAGCATCTAAGGGAGGCATCCAATGATGGAGTTGCTGTTGATCTAAGCGCCAAGGTGGCAACACTCACAGCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTACATGGACCAGGACTTCAATGAGAAGGGGTTCAAGGCTGTGGTGAAAGAAGGGATGCATTTAACAGCAACCCCTAACATAGTGAGCAAAATCTATGACGACTTCTTTGATAAAATTATTGATGAGCATATACAATCAGATAATAGAGAAGACAGGATCAAGGATTTTGTGGATGTCATGTTGGGCTTTGTTGGTACTGAAGAATCTGAATACCGTATTGAAAGGCCCAATATCAAAGCCATATTGCTGGATATGCTGGTGGGTTCAATGGATACATCAGGTACAGCGATTGAGTGGACAATTTCAGAGCTTCTCAAGCATCCAGGGGTGATGAAGAAAGTCCAAAAGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCAGACTTGGACAACTTGGAGTATTTGGACATGGTCATAAAGGAAAGCTTTAGGCTCCATCCGGTGGCACCATTACTACTACCACATCAATCTTTGGAAGATTGCATGGTTGGAGGCTTTTTCATACCTAAAAACTCCAGGGTCATAGTAAATGCATGGGCAATTATGCGAGACCCAAGTGCATGGACTGACCCAGAGAAATTCTGGCCGGAGAGATTTGAGGGAAGCAACATAGATGTCCGAGGGCGTGACTTCCAACTCATACCATTTGGTTCTGGCCGAAGGGGCTGTCCCGGAATGCAACTGGGTCTAACTGTGGTTCGATTAGTGGTGGCCCAGCTTGTGCATTGCTTTGACTGGAAGCTACCAAATGACATGTTACCAACTGATTTGGACATGAATGAGGATTTCGGCCTCATAATGTCCAAGGCCTGCCATCTTGTTGTCGTTCCTACTTACCGTCTCCATAATGAAAAGGACTAG 1428 0.4517 MIWLAIFLASLTCLWLWRSRKKAKRLPPGPRGLPILGCLHMLGANPHRDLHQLAQKHGPIMYLHMGFVPTIVVSSPQAAELFLKTHDLAFASRPLLEAEKYISWDHRSMSFAEYGSYWRNMRKMCTLEMLSHTKISSFRRLREEELDLLIKHLREASNDGVAVDLSAKVATLTADMSCRMVLGKKYMDQDFNEKGFKAVVKEGMHLTATPNIVSKIYDDFFDKIIDEHIQSDNREDRIKDFVDVMLGFVGTEESEYRIERPNIKAILLDMLVGSMDTSGTAIEWTISELLKHPGVMKKVQKELETVVGMKRKVEESDLDNLEYLDMVIKESFRLHPVAPLLLPHQSLEDCMVGGFFIPKNSRVIVNAWAIMRDPSAWTDPEKFWPERFEGSNIDVRGRDFQLIPFGSGRRGCPGMQLGLTVVRLVVAQLVHCFDWKLPNDMLPTDLDMNEDFGLIMSKACHLVVVPTYRLHNEKD* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00875 475 PANTHER CYTOCHROME P450 93A3-LIKE 213 471 - -
Rops2g00875 475 PRINTS E-class P450 group I signature 325 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS E-class P450 group I signature 366 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 CDD CYP71-like 56 462 - -
Rops2g00875 475 FunFam Cytochrome P450 83B1 208 465 - -
Rops2g00875 475 SUPERFAMILY Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 Gene3D Cytochrome P450 15 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 Pfam Cytochrome P450 27 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00875 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00875 Rops-Chr2 12390929 12401948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00875 35 469 Cytochrome P450 AT3G26210 40.347 5.47e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00875 K20562 - gmx:100809526 764.992