Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00867 ATGATTTGGATAACAAATTTTCTAGCTTCTCTTGCTTGTTTGTGGCTATGGAGAAGCAAGAACAAGGCAAAGAGATTACCTCCTGGTCCAAGAGGGTTGCCAATTTTGGGGTGCCTTCACATGTTGGGGGGAAATCCTCATCGTGATCTGCATAAACTAGCTCAAAAATATGGACCTATCATGCACTTGCGCTTGGGTTTTGTGCCCACCATTGTTGTTTCTTCACCTCAAGCTGCTGAGCTGTTCCTGAAGACCCATGACCTTGTCTTTGCAAGTAGACCACCTCATGAGGCTGCAAAGTACACCAAGTGGGAGCAGAGGGACCTCACCTTCGCTGAACATGGTTCTTATTGGCGTAACATGCGTAAGATGTGCACATTGGAATTGTTAAGCCATACAAAAATTAACTCCTTCAGGCGCATGAGGGAAGAGGAGCTTGACCTATTGATCAAGCTCCTAAGAGAAGCATCCATTGATGAAGTTGCTGTTGATCTAAGCGCCAAGGTGGCAACACTCACAGCAGACATGAGTTGTAGAATGGTTTTGGGTAAGAAGTACATGGACCAGGACTTCAATGAGAAGGGGTTTAAGGCTGTGATGCAAGAGGGAATGCATTTAGCAGCAACTTTTAACATAGCTGATTACATTCCTTATATTGGAGCACTTGACCTTCAAGGGCTAACTAAACGCATGAAGGCAATGCGCAAAATCTTCGACGACTTCTTTGATAAAATTATTGATGAGCATATGCAATCAGAGAACAGAGAAGAGAAGACCAAGGATTTCGTGGATGTCATGTTGGGCTTTGTTGGTACTGAGGAATCTGAATACCGTATTGAACTTCCCAATATCAAAGCCATAATGCTGGATATGCTAGTGGGTTCAATGGATACTTCTGCCACGGCGGTGGAGTGGACAATTTCAGAGCTCCTCAAGCATCCAAGGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCAGACTTGGACAAGCTGGAGTATTTGGACATAGTTATAAAGGAAAGCTTGAGGCTCCATCCAGTGGCACCATTACTAGCACCACATCAATCCATGGAAGATTGCATGGTCGGAGAATATTTCATACCTAAAAACTCGAGGGTCATAGTAAATGCATGGGCAATCATGAGAGACCCAAGTGCTTGGACTGACCCAGAAAAGTTCTGGCCTGAAAGATTTGAGGGAAGTAACATGGATGTTCGAGGGCGTGACTTCCAATTTATACCATTTGGTTCTGGCAGAAGGAGTTGTCCTGGATTGCAATTGGGTCTAACTGTAGTTCGTTTAGTGGTGGCCCAACTTGTGCATTGCTTTGACTGGAAGCTACCGAATGATATGTTGCCAATTGATTTGGACATGACTGAGGAGTTTGGCCTGACAATGCCTAGGACCAACCATCTTGTTGCCATTCCTACTTATCATCTTCACACTGAAAATGATCAGGGAAAAATGCTATAA 1506 0.4429 MIWITNFLASLACLWLWRSKNKAKRLPPGPRGLPILGCLHMLGGNPHRDLHKLAQKYGPIMHLRLGFVPTIVVSSPQAAELFLKTHDLVFASRPPHEAAKYTKWEQRDLTFAEHGSYWRNMRKMCTLELLSHTKINSFRRMREEELDLLIKLLREASIDEVAVDLSAKVATLTADMSCRMVLGKKYMDQDFNEKGFKAVMQEGMHLAATFNIADYIPYIGALDLQGLTKRMKAMRKIFDDFFDKIIDEHMQSENREEKTKDFVDVMLGFVGTEESEYRIELPNIKAIMLDMLVGSMDTSATAVEWTISELLKHPRVMKKVQMELETVVGMKRKVEESDLDKLEYLDIVIKESLRLHPVAPLLAPHQSMEDCMVGEYFIPKNSRVIVNAWAIMRDPSAWTDPEKFWPERFEGSNMDVRGRDFQFIPFGSGRRSCPGLQLGLTVVRLVVAQLVHCFDWKLPNDMLPIDLDMTEEFGLTMPRTNHLVAIPTYHLHTENDQGKML* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00867 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Rops2g00867 501 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 SUPERFAMILY Cytochrome P450 27 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 Gene3D Cytochrome P450 15 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 CDD CYP71-like 56 483 - -
Rops2g00867 501 PANTHER CYTOCHROME P450 93A3-LIKE 5 492 - -
Rops2g00867 501 FunFam Cytochrome P450 83B1 14 486 - -
Rops2g00867 501 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00867 501 Pfam Cytochrome P450 27 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00867 Rops-Chr2 12352718 12354402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00867 2 487 Cytochrome P450 AT5G07990 41.283 1.07e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00867 K20562 - gmx:100809526 832.402