Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00865 ATGGATAAAGAAGACTTATCCTCATCTTCTTCGAAACACTACTACCCTTATCAACCCCACCACCATGTTTCCACCACTAACACCACCTTCAACACAAGCCCAATCGACACCACTCCTACCACCACCACCCCAGATTACTCCTACTCACCCACAATCCTCCTCGAAACCGCACGTGCCATTGCCGACAAGAACAGCAATCGAATGCAACAACTGATGTGGATGCTGAATGAACTAAGATCTCCTTATGGTGACACTGATCAAAAGCTCGCATCTTATTTTCTTCAAGCCTTGTTTAGTCGCATGACCGATGCAGGGGACCGAACCTATCGAACCTTAGCTTTGGGTCTCAGAAAACATGCTCCTTCGAATCAATGA 375 0.4667 MDKEDLSSSSSKHYYPYQPHHHVSTTNTTFNTSPIDTTPTTTTPDYSYSPTILLETARAIADKNSNRMQQLMWMLNELRSPYGDTDQKLASYFLQALFSRMTDAGDRTYRTLALGLRKHAPSNQ* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00865 124 MobiDBLite consensus disorder prediction 10 46 - -
Rops2g00865 124 ProSiteProfiles GRAS family profile. 40 124 IPR005202 -
Rops2g00865 124 MobiDBLite consensus disorder prediction 1 46 - -
Rops2g00865 124 Pfam GRAS domain family 52 113 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00865 Rops-Chr2 12318318 12319316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00865 42 112 GRAS Transcription Factor Family AT4G37650 58.442 1.08e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g00865 GRAS 1.8e-12 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00865 - - cave:132186746 144.436