Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00855 ATGGACTACTATCTTGTGAACCCTCATCCTAACCCCAATTATGCTCACTCTTTTGATATGATAACTCCATCATCCTCTGAGTTTATACTATCTGATTATCTCATGCTCGATGATTGTGTTGATCATCAAGAGTCTCGTTCACAAAGTCCTGAATCATCCTTCGGTGATGCTGGTCAAGGCTTCAATGGTGCAACCTCTAAAAACAATAACATAAAATGCAAAAATGGGATTAAGCGAAATAAGGCAGAAGAGATGCAAAGAATCGCGTTTAGAACCAGATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGAAAGAAGTCCGTGAAGAACAGTCCGAATCTACGGAACTACTACAAATGTTCAAGTGAAGGATGCAACGTGAAGAAAAGGGTGGAAAGGGATAGAGATGACTCTAGCTACGTGATAACAACTTATGAAGGTGTGCACAACCATGAGAGTCCATTTACCTCACACTACAACCAAATCTCCTTCCTACATTCTGATGCTTAA 525 0.4076 MDYYLVNPHPNPNYAHSFDMITPSSSEFILSDYLMLDDCVDHQESRSQSPESSFGDAGQGFNGATSKNNNIKCKNGIKRNKAEEMQRIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNLRNYYKCSSEGCNVKKRVERDRDDSSYVITTYEGVHNHESPFTSHYNQISFLHSDA* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00855 174 FunFam WRKY transcription factor 57 85 159 - -
Rops2g00855 174 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00855 174 MobiDBLite consensus disorder prediction 46 69 - -
Rops2g00855 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 162 IPR044810 GO:0003700
Rops2g00855 174 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00855 174 SUPERFAMILY WRKY DNA-binding domain 91 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00855 174 Gene3D WRKY domain 83 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00855 174 MobiDBLite consensus disorder prediction 45 69 - -
Rops2g00855 174 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00855 Rops-Chr2 12160451 12162120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00855 7 167 WRKY Transcription Factor Family AT5G64810 45.977 4.21e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g00855 WRKY 3.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00855 - - gmx:100500248 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00855 2 12160451 12162120 Rops2g00855 2 12160451 12162120 ECH