Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00848 ATGGTTGTCACCACTAGTGAACTCATCTACTCTATCACCTTCTTCACTTCACTTCACTTCACTTCAACGGGTCGTTGGACCTTGATGGGTCCCCTTGCACTTTCCGTTACGATGCAAGATTCTTCAATTTCATTACCGGATGCTTGTACTAAGAGAAAACAGTCCTTGCTTATGAGAAATTCGTTTGCATCAGTTAGCATGGGAGAGGAAAAGCCCTTTGACTTCTTACGCACTTTATTTGAGGGTGTTATTGCTGGAGGTACTGCTGGAGTTGTTGTCGAAACAGCTTTATACCCAATTGACACTATAAAAACACGTCTGCAGGCTGCTCGTGGAGGAGAAAAACTAATATTGAAAGGCCTTTATTCTGGATTGGCAGGGAACCTGGCTGGTGTCTTACCGGCATCTGCTCTATTTGTTGGAGTATATGAACCTATAAAGCAGAAATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTTTTGCTCATTTTACTGCAGGTGCCATAGGGGGCATTGCTGCTTCATTCGTTCGTGTTCCAACTGAGGTTGTCAAGCAACGAATGCAAACAGGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTTTATTGCATCTAAGGAGGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTATTGCGAGATTTGCCTTTTGATGCCATTCAGTTTTGCATCTATGAACAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCAATTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATAAAGACAAGGTTAATGGTTCAGGGATCTGCAAACCAATATAAGGGAATTGTAGATTGTGTTCAAACCATTATGAAGGAAGAGGGACCTCGTGCCTTTTTGAAGGGTATTGGGCCAAGGGTCCTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGCGTACAAAACGTTTCCTTGCTGAGAGGCGTCCTACACTAGCCCCGTACACCAACTCCGAAAAAAGTAAAGATTGA 1065 0.43 MVVTTSELIYSITFFTSLHFTSTGRWTLMGPLALSVTMQDSSISLPDACTKRKQSLLMRNSFASVSMGEEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFAHFTAGAIGGIAASFVRVPTEVVKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIMKEEGPRAFLKGIGPRVLWIGIGGSIFFGVLERTKRFLAERRPTLAPYTNSEKSKD* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00848 354 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 81 348 - -
Rops2g00848 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 335 IPR018108 -
Rops2g00848 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 149 IPR018108 -
Rops2g00848 354 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 57 340 - -
Rops2g00848 354 SUPERFAMILY Mitochondrial carrier 80 330 IPR023395 -
Rops2g00848 354 Gene3D Mitochondrial carrier domain 76 344 IPR023395 -
Rops2g00848 354 PRINTS Mitochondrial carrier protein signature 213 231 IPR002067 GO:0055085
Rops2g00848 354 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Rops2g00848 354 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Rops2g00848 354 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Rops2g00848 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 158 240 IPR018108 -
Rops2g00848 354 Pfam Mitochondrial carrier protein 253 338 IPR018108 -
Rops2g00848 354 Pfam Mitochondrial carrier protein 158 239 IPR018108 -
Rops2g00848 354 Pfam Mitochondrial carrier protein 79 113 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00848 Rops-Chr2 12069055 12089807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00848 152 341 Chloroplast and Mitochondria Gene Families AT1G07030 30.256 2.37e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00848 K15111 - gmx:100811130 582.408