Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00845 ATGTCAACTATTGTTAACCATAGTTTATTTGAGGAGCAGAATCAGATGCCTACACAATTCATTCCTTTCCCAACAAATCTCACTTTCCCTCCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCATTTGCCTCTGAAGATTCTTCTACATCAAATCTAACTGAAACCCTATTCGCAACCACTGCTCAAAAATCAAGGGAATACCTTGGTTCTAGCTTTGGAGGAGCTCAATTCCTATCCTTGCACAGATCAAGTGCAAATCCATGGGCATCAGGAGAAGTAACTGATTGCTTCAGCAATAAAAGAAGTGGAGTAGATGATCATCATCTAGGGATTTCTACCATGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTGAGAGAACCTAGGTTTTGCTTCAAGACCATGAGTGATGTGGATGTGTTGGATGATGGCTACAAATGGAGGAAATATGGACAGAAAGTAGTGAAGAACACTCAGCACCCCAGAAGCTACTACCGTTGCACACAAGACAATTGTCGTGTAAAGAAACGTGTGGAGCGTTTGGCTGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGCACACTCTCCATCAAATGATCTTGAAGACTCTCAAAATCAATCTGAATTTAGCAATTTCTTATGGTAG 657 0.411 MSTIVNHSLFEEQNQMPTQFIPFPTNLTFPPLKAFSSIASSFASEDSSTSNLTETLFATTAQKSREYLGSSFGGAQFLSLHRSSANPWASGEVTDCFSNKRSGVDDHHLGISTMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQNQSEFSNFLW* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00845 218 FunFam WRKY transcription factor 57 127 201 - -
Rops2g00845 218 MobiDBLite consensus disorder prediction 192 218 - -
Rops2g00845 218 ProSiteProfiles WRKY domain profile. 136 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00845 218 Gene3D WRKY domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00845 218 SUPERFAMILY WRKY DNA-binding domain 133 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00845 218 Pfam WRKY DNA -binding domain 142 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00845 218 SMART WRKY_cls 141 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00845 218 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 202 IPR044810 GO:0003700
Rops2g00845 218 MobiDBLite consensus disorder prediction 203 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00845 Rops-Chr2 12018467 12020297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00845 111 218 WRKY Transcription Factor Family AT4G39410 77.876 6.39e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g00845 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00845 - - pvu:PHAVU_002G266400g 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00845 2 12018467 12020297 Rops2g00845 2 12018467 12020297 ECH