LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g00817	ATGAAAGGAAACAAGCCCTTTCTTGTTGTGATTATCATACAAGCCATATATGCTGCCATGTTTCTTCTCTCAAAAGCTGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGACCGCAGCCACTGTTTTCCTAATCCCTTTCGCCTTTTTCTTTGAATGGAAAACTGCACCCCCTTTGTCATTCATCACCTTCTGCAAGATTTTCTTCCTTTCTTTCATTGGGATCACTTCGAGTTTGGACATATATGGTATTGCTCTTATTAACACTTCTGCAACTTTGGCTGCTGCTACGACAAACTGTCTTCCAGTTATTACCTTCTTCTTGTCTCTCCTACTCAGGATTGAAAGTTTGAAAGTAAAGACAGCCCCTGGGGTTGCTAAGTTGGTTGGTATTGTGGCATGCTTGGCAGGAGCAGCAACCCTTGCTTTTTATAAAGGTCCTCATTTGGAACTTTTAAGCCATCATCACCTTTTCGGGTACCATAAAAGCCAACAACATCGGGTTCCATCTGGGTCATGGGTAAAGGGTTGCTTCCTCATGCTCCTCTCCAATACCTGTTGGGGAATGTGGCTTGTACTACAGACTTTTGTCATAAAAGGCTACCCTTCAAAGCTGCTTCTCACAACTCTTCAATGTTTCTTAAGCTCAATTCAGTCTTTGGTCATTGCCTTGGCCGCAGAAAGAGACATTGAGCAATGGAAGTTAGGTTGGAATGTCAGACTCCTCGCTGTAGTATATTGTGGAATTATGGTGACTGGTGTCACATATTACTTACAAACATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTAGCGATGTCAACACCCCTAGCTCTGGTCATGACCATCTTCTCCTCTGCAATTCTCTTGGGCGAGATAATTAGTTTGGGAAGCCTTCTAGGTGGCATCGCTTTGGTTCTAGGACTATACTGCGTGCTGTGGGGAAAGAGAAAAGAGCAGATGCCGAAAGCCACGTTAGACTTGGAGCAGGCATCGAATCAGAGTGAACACACAACTGTTCCCAAGTGTTAG	1047	0.4365	MKGNKPFLVVIIIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQTAATVFLIPFAFFFEWKTAPPLSFITFCKIFFLSFIGITSSLDIYGIALINTSATLAAATTNCLPVITFFLSLLLRIESLKVKTAPGVAKLVGIVACLAGAATLAFYKGPHLELLSHHHLFGYHKSQQHRVPSGSWVKGCFLMLLSNTCWGMWLVLQTFVIKGYPSKLLLTTLQCFLSSIQSLVIALAAERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALVMTIFSSAILLGEIISLGSLLGGIALVLGLYCVLWGKRKEQMPKATLDLEQASNQSEHTTVPKC*	349

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g00817	348	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	40	150	-	-
	Rops2g00817	348	PANTHER	WAT1-RELATED PROTEIN	5	332	IPR030184	GO:0016020\|GO:0022857
	Rops2g00817	348	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	238	323	-	-
	Rops2g00817	348	Pfam	EamA-like transporter family	180	318	IPR000620	GO:0016020
	Rops2g00817	348	Pfam	EamA-like transporter family	7	144	IPR000620	GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g00817	Rops-Chr2	11700802	11704970	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g00817	1	252	Nodulin-like Gene Family	AT5G64700	62.016	3.04e-95	282

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g00817	-		-	ccaj:109799350	558.14

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