Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00809 ATGGCTGCCATGAACTCCAGTGTCTTGGCATGTAGCTATGCTAGATCTGGTGACCTCAATGTGAAGCTCACTTCCATGCCTTCGGTTTCAGTCTCTTGTCACAAGTTGCCTATGATCAAGGCACAAAAGGCCATGGTTTCCCAACCCAAAGAATCACAAGCAAACGAAGGAAGGAGAGGTGCCCTTGTTTTATTGGCAGCTACCCTTTTCACTGCTGCAGCTGCTTCTTCCAATTCTCCTGCCAATGCTTCGGTCTTTGATGAATACCTTGAAAGGAGCAAGGCCAACAAGGAACTGAATGACAAGAAGAGGTTAGCTACAAGTGGAGCAAATTTTGCAAGAGCATACACTGTTCAATTTGGCACTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTAGCCAAGCAAAAGAAAGTGCCATATATTTCTGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 507 0.4438 MAAMNSSVLACSYARSGDLNVKLTSMPSVSVSCHKLPMIKAQKAMVSQPKESQANEGRRGALVLLAATLFTAAAASSNSPANASVFDEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPYISDDLELECEGKDKYKCGSNVFWKW* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00809 168 Gene3D - 84 168 IPR044907 -
Rops2g00809 168 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 168 IPR008796 GO:0009522|GO:0015979
Rops2g00809 168 FunFam Photosystem I reaction center subunit N 84 168 - -
Rops2g00809 168 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 37 168 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00809 Rops-Chr2 11634769 11635743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00809 1 139 Calmodulin-binding Proteins AT5G64040 61.905 8.02e-54 167