Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00804 ATGAGTTTCGCCGGCACAGAAAGCTCAGAAGAGGGTGCAGGGCATCCGGAGCCTCCTGATCCTGATGTGCTTGAAATTGATCCTACTTGTCGCTACATCAAGTATAAAGAAGTGGTGGGCAAAGGAGCCTTCAAAACTGTCTACAAGGCATTTGATGAAGTCAATGGAATTGAAGTTGCATGGAGCCAGGTTCAGATTGATGAGGTGTTACAGTCACCGGGTGACTTAGAGAGGCTATACTCAGAAGTGCATCTCTTGAGATCACTGAGGCACAACAACATAGTAAGATTCTACAATTCCTGGATTGATGACAAGCGCAAGACTGTTAATATGATTACTGAGTTGTTTACCTCGGGTAGCCTCAAACAGTATCGTAAAAAACACAAGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAACTACCTCCACAGCCACAACCCTCCGGTTATTCATAGGGACATGAAATGTGATAATATATTTATCAATGGTCACCAAGGAGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAGAGGACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTTATGGCACCTGAGCTGTATGATGAAAACTACAATGAATTAGCTGACATATATTCCTTTGGCATGTGCATGCTTGAGTTGGTGACTTCCGAGTATCCTTATAGTGAATGCAGAAACTCGGCACAGATATACAAGAAAGTTTCATCTGGTATAAAACCTGTTGCTCTTTCTAAAGTGATAGATCCAGAAATAAAATCATTTATTGAGAAATGTCTTGTCCCTGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGATGGACCCCTTTCTCCAAGTGAATGGTTCAACAAAGAATTGTCCTTTTCCATTGCCAGATATTGTTCTTCCCAAATTGGGAGCCTTTGAAAGCCGATGTATGATGTCAGAAGGTCCTGCTGGTGCACGTAATGGAGCCATTTCCATGGATGTCGGTGGCACCAGTGAGCTACCCGTGATCATTGTATTTGATAGTTCTACTGATGATGCATCGCGTCCTCCATGTGTTGAGATAAGAAGGTTGAAGGGAGGTGATATCTTCTTTCTAAAAGGTGAAGAAAATGATGAGAATTCTGTGTCATTAGTTCTGCGGATAGCTGATCAGAGTGGACGAGCAAGAAATATCCACTTTATATTCTACCTTGATAGTGATACTGCTGTCTCAGTTTCAAGTGAAATGGTTGAGCAACTTGAACTTGCTGATCAGAATGTTAAATTCATAGCAGAGTTAATTGATTTGTTATTGATGAATTTGGTTCCTGATTGGAAACCTTGTGTGGTAATTGATCATTTGGTTTCTTCAAATGATAAATGGACTCATGCGAGCCAACAGAAAGACTTGGAGTCAGCAAAATACAAAGGAAACTCAAAACATTCTACCAAAATTGTGGCTGAAGATGCAGGTCCCTCAACCTTGTCTGGAAGATCAGCTGCAAAAGAAAACCTTGATAATATGGATTTGTGTTCTGAGATGTCATATGCTTCTGCAGCATCAGACTTCAATGATAATAAGCTTTCTATCATTTCATTCATATCCGTCGAATCAGGATTTGATAGAGGGAGTCAATCCTCATTTGCATCTGAAATTGGGGCATCATGTGATTATAGGATCAAGTTTTCAGACACACTGAGCAATGGTATGATGAGCCTCTCTAGTTATCCCATCAGTGTTTCCTCCTTGTCTGAACCTGAAGATGAGCTGAGAATAGAGTTAGAAATGATTGAACGGAAGTATCAAGAGGCACTTGAAGACTTATCCAAAAGAAGACAGCAGGCCATCATGGAGATTAAAAGGAGAATGTCTGAGAAGACGGCCAGGTGGCCAATGAAAAGGGGTAACTCATCATTTCAAATTCTTCTCTCACTTGTATCTTTTTCATTTCTCGCACACCTTTGGTTCTTTGCACCGGAACCCATTCGGCCATTGGGGTCCTCGCTGAACTCAGGATTTTCTCGGAATTCCTCCCTGAATATCCAAACCATCACAATTGTATCAAAGCATCGACCTGGTGTTTTGAAGATGGCTGCCGGAACCCGTAACCAAATCTCCATTGTTGAGCTCGATCAAGCTCGACATTGCCAGCAGATGCACAAGAAGAAAATCGAGCCAAGTTTGACTGCATGA 2199 0.4175 MSFAGTESSEEGAGHPEPPDPDVLEIDPTCRYIKYKEVVGKGAFKTVYKAFDEVNGIEVAWSQVQIDEVLQSPGDLERLYSEVHLLRSLRHNNIVRFYNSWIDDKRKTVNMITELFTSGSLKQYRKKHKKVDMKAVKGWARQILMGLNYLHSHNPPVIHRDMKCDNIFINGHQGEVKIGDLGLATFLERTNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVIDPEIKSFIEKCLVPASQRLSAKELLMDPFLQVNGSTKNCPFPLPDIVLPKLGAFESRCMMSEGPAGARNGAISMDVGGTSELPVIIVFDSSTDDASRPPCVEIRRLKGGDIFFLKGEENDENSVSLVLRIADQSGRARNIHFIFYLDSDTAVSVSSEMVEQLELADQNVKFIAELIDLLLMNLVPDWKPCVVIDHLVSSNDKWTHASQQKDLESAKYKGNSKHSTKIVAEDAGPSTLSGRSAAKENLDNMDLCSEMSYASAASDFNDNKLSIISFISVESGFDRGSQSSFASEIGASCDYRIKFSDTLSNGMMSLSSYPISVSSLSEPEDELRIELEMIERKYQEALEDLSKRRQQAIMEIKRRMSEKTARWPMKRGNSSFQILLSLVSFSFLAHLWFFAPEPIRPLGSSLNSGFSRNSSLNIQTITIVSKHRPGVLKMAAGTRNQISIVELDQARHCQQMHKKKIEPSLTA* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00804 732 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 20 625 - -
Rops2g00804 732 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Rops2g00804 732 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Rops2g00804 732 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00804 732 Coils Coil 589 620 - -
Rops2g00804 732 Gene3D - 382 470 - -
Rops2g00804 732 SUPERFAMILY Protein kinase-like (PK-like) 35 291 IPR011009 -
Rops2g00804 732 FunFam Serine/threonine-protein kinase WNK8 382 477 - -
Rops2g00804 732 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Rops2g00804 732 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00804 732 CDD STKc_WNK 31 290 - -
Rops2g00804 732 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00804 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Rops2g00804 732 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Rops2g00804 732 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00804 Rops-Chr2 11577930 11586145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00804 3 624 MAP Kinase Kinase Kinase AT5G41990 48.315 1.63e-171 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops2g00804 Pkinase 6.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00804 K08867 - gmx:121175054 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00804 2 11577930 11586145 Rops2g00804 2 11577930 11586145 ECH
Rops2g00804 2 11577930 11586145 Rops10g01028 10 21870413 21874132 PCT