Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00775 ATGGCATCAGGTGGAAGTGTCAACCTTCCTCCTGGGTTTTTCTTCTCTCCAACAGATGAAGAACTTGTCCTTCACTTTCTTTGTTCCAAGGCTTCTTTACCATACCATCCCAACATCATACCTGATCTTGATTTGTCTCTGATTGATCCTTGGGAGTTAAACGGTAAAGCGCTGTCAAGTGGAAATCAACACTATTTTTTCACCCAAATGAATAAAAGCAAATCCACAGAAAATGGATATTGGAAGGAAATAGGAATCACCAAACCTATAGTCTCAGCTGCTGAAAATAAAGTTGGAATCAAGAAGTTCCTAGAATTCAACCTTGGGGAAGCTCCACAAAGCACTGAAACCAATTGGGTAATGGAAGAATATCATATTTGCTCATCTGGGTTTAGGAGAAATCCTGATCGAAGTTTGAGTAAATGGGTTTTATGTAGAGTCTATGAAAAGAAGAGATCACAGTCCCAACAAGGTGCAAACTGTTGTAGTGATGAGGATGATAGTGGAACAGAAGTTTCATGGCTAGACGAAGTTTTTATGTCATTAGATGATGATGTTGAAGAAACAAGCCCTGCCTAA 579 0.3938 MASGGSVNLPPGFFFSPTDEELVLHFLCSKASLPYHPNIIPDLDLSLIDPWELNGKALSSGNQHYFFTQMNKSKSTENGYWKEIGITKPIVSAAENKVGIKKFLEFNLGEAPQSTETNWVMEEYHICSSGFRRNPDRSLSKWVLCRVYEKKRSQSQQGANCCSDEDDSGTEVSWLDEVFMSLDDDVEETSPA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00775 192 PANTHER NAC TRANSCRIPTION FACTOR 56 9 164 - -
Rops2g00775 192 SUPERFAMILY NAC domain 4 150 IPR036093 GO:0003677|GO:0006355
Rops2g00775 192 ProSiteProfiles NAC domain profile. 9 150 IPR003441 GO:0003677|GO:0006355
Rops2g00775 192 Pfam No apical meristem (NAM) protein 10 126 IPR003441 GO:0003677|GO:0006355
Rops2g00775 192 Gene3D NAC domain 18 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00775 Rops-Chr2 11065177 11066218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00775 7 157 NAC Transcription Factor Family AT1G52890 41.875 1.52e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops2g00775 NAM 4.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00775 - - gmx:100779578 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00775 2 11065177 11066218 Rops2g00775 2 11065177 11066218 ECH