Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00760 ATGGTTGGTCTTATGCCATTTTCTGGCGTAGAAAGTAGAAACATTTCTTCTTCCATGGATAAAATACTCCAAATCATTCAGTTGTTCAACTGTCTCATGTTATTTATACTTGTTCAATTCTATGCACTGGGGAAGTTGTTGACTGTGGAAGAAGCATACTATGAAGAGCAATTAGGAGAAGAGATTGCAAACTTGCTTCCACAGGTGCACTTGCTTGGAGAAGGAATTGTTGGTGAAGCTGCTCTCACGGGCAAGCACAGTTGGGTGCACTCAGATACTCAAACCCAAGAATGGAATTTGGTAGGCGAGAATATTTGTGAGGTTGATTTTGGATTGCATAAACAATTCTCCTCTGGGATAAAGACAATTGTGGTCATACCTGTCAAAACTTGGGTAGTGGTGCAGTTTGGATCCAAAAAGAAGGTTGCATCCATACATAAACAAGTGCAGGCTTAA 456 0.4057 MVGLMPFSGVESRNISSSMDKILQIIQLFNCLMLFILVQFYALGKLLTVEEAYYEEQLGEEIANLLPQVHLLGEGIVGEAALTGKHSWVHSDTQTQEWNLVGENICEVDFGLHKQFSSGIKTIVVIPVKTWVVVQFGSKKKVASIHKQVQA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00760 151 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 150 IPR025610 -
Rops2g00760 151 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 45 143 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00760 Rops-Chr2 10769362 10771312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00760 46 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G64625 41.237 2.27e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00760 - - gmx:100813558 149.058