Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00748 ATGAAAAGCCTATGTATTGGGCCGTTCCTTGTTGCCAGTGCCCCAGTTGGTAGCAGAGCCTTTGCAGACCATTTAACCAGAAAGTGTTTCCGCAAGCAACTTCACTTCCACTCCCGTTGTGTTGTTTTCTCTTCATTCTCATGTTCTGCAACTCTATCAGTGGTGCCAGAATTAGAAGAGAAGCAAGTATTTGATGGGGAGAAGGCTTCTTTGCTTGTTAGAGAGCTCAGAAAGAGCTTTGATTCCGGCAGGACAAAGAGCTATGAATGGAGGATTTCCCAATTGGAGGGCATAGCTAAGATGCTAGAAGAGAAAGAGAAGGAAATTATTGAAGCTCTTGATAAGGACCTTTCTAAACCTGCACTTGAAGCATTTATAACTGAGATTTCCCAGGCAAAATCCTCATGTAGTGAAGCACTTCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAAAACTTCAATCACAACATATCCATCATCAGCAGAGATTGTGCCAGAACCACTTGGAGTTGTGTTGGTTATCTCCACATGGAACTTTCCTTTCTTGTTATCATTGGATCCAGTCATTGGAGCCATTTCAGCGGGTAACGCAGTGGTCCTGAAACCTTCAGAAATTTCTCCAGCGACATCATCACTGCTTGCAAATTTGATCGAAAATTATCTAGATAACTCTGCCATAAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTCCTAGAGCAGAAGTGGGATAAGATCCTTTACACAGGAAGTGCTAGAGTAGGTCGCATTGTTATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTTTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAACTGGAAAGTGGGCATGTAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACGAGAAAAGAATTTGCTCCGAAGCTGATAAATGCTTTAAAAGAACAATTGGAGCAATGTTTTGGGAAAGATCTGATGGAATCAAAAGACATGTCACGTATTGTGTCACCAACTCAGTTTGCACGACTCATAAAGCTCTTGGATGAGGATAAGAAGGATTGCCCCAACTATCGTGTTGGATGTTCCACAAGAATCTATGATAATGCAAGAGGAGATATTTGGGCCAATACTGCCAATTATCACTGTAGACAACTTAGAAGATTGCTTCAGTATAATCAAATCAAAGCCAAAACCTCTAGCCGCATATCTCTTCACAAACAATGA 1275 0.4173 MKSLCIGPFLVASAPVGSRAFADHLTRKCFRKQLHFHSRCVVFSSFSCSATLSVVPELEEKQVFDGEKASLLVRELRKSFDSGRTKSYEWRISQLEGIAKMLEEKEKEIIEALDKDLSKPALEAFITEISQAKSSCSEALQELKHWMKPEKVKTSITTYPSSAEIVPEPLGVVLVISTWNFPFLLSLDPVIGAISAGNAVVLKPSEISPATSSLLANLIENYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSDVNLQVTARRIITGKWACNSGQACISVDYIITRKEFAPKLINALKEQLEQCFGKDLMESKDMSRIVSPTQFARLIKLLDEDKKDCPNYRVGCSTRIYDNARGDIWANTANYHCRQLRRLLQYNQIKAKTSSRISLHKQ* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00748 424 Coils Coil 95 115 - -
Rops2g00748 424 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 277 IPR016162 GO:0016491
Rops2g00748 424 FunFam Aldehyde dehydrogenase 77 281 - -
Rops2g00748 424 Pfam Aldehyde dehydrogenase family 67 379 IPR015590 GO:0016491
Rops2g00748 424 PANTHER ALDEHYDE DEHYDROGENASE 69 368 IPR012394 GO:0006081
Rops2g00748 424 SUPERFAMILY ALDH-like 72 385 IPR016161 GO:0016491
Rops2g00748 424 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 368 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00748 Rops-Chr2 10630515 10635386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00748 46 367 Aldehyde Dehydrogenase Gene Family AT4G34240 70.497 8.48e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00748 K00128 - gmx:100800699 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00748 2 10630515 10635386 Rops2g00748 2 10630515 10635386 ECH