Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00730 ATGGCTTCTCCTCCTGTGAACCCTTTACCGGTAGCATATCAAGCATGGACGAGTCTGGCAGTACCAGACTGGTTGAACAAAGGAGACAACGCATGGCAAATGGTAGCAGCAACCCTTGTGGGGATTCAAAGCATGCCAGGGTTGGTGATCCTATATGGAAGCATAGTGAAGAAGAAATGGGCTGTGAACTCGGCTTTCATGGCTTTATATGCATTTGCAGCAGTTATCATTTGTTGGGTTACATGGGCTTATAAGATGTCATTTGGGGAGAAGCTATTACCCTTTTGGGGGAAAGCTGGGCCTGCTTTAGGGCAGAAGTTTCTGATCAAACAGGCCGGGCTACCCGCCACTCCACATTATTATCATAATGGTGAGGTGGAGACTGCTGAGATTGAGCCATTTTATCCCATGGCTACTATGGTGTGGTTTCAGTGTGTTTTTGCAGCCATTGCACTTATTATATTGGCTGGATCTGTGTTGGCTAGGATGAATTTCAAAGCTTGGATGATGTTTGTTCCACTTTGGCTCACTTTTTCTTACACTATTGGTGCTTTTAGTTTGTGGTGTGGTGGGTTCTTGTTCCAGTGGGGTGTTATGGACTACTCTGGTGGTTATGTTATTCATCTTTCTTCAGGGATTGCTGGTTTCACTGCTGCTTATTGGGTGGGGCCTAGATCAAAGAAGGACAGAGAGAGATTCCCACCAAACAATGTGTTACTAACATTGACAGGAGCAGGGTTACTATGGCTGGGATGGGCAGGTTTCAATGGAGGAGATCCCTACGCTGCCAACACTGACTCCTCCATGGCAGTGCTCAACACCAACGTCTGTGCAGCCACCAGCCTTTTAGTATGGACATGGCTTGATGTCATTTTCTTCAACAAACCCTCTGTTATTGGAGCTGTTCAAGGCATGATCACTGGCCTGGTTTGCATTACTCCCGGTGCTGGTCTGGTTCAAGGATGGGCTGCCATAGTGATGGGAGTACTTTCAGGCAGTGTGCCATGGTTCACCATGATGGTACTTGGAAAGAAGTTGACATTGTTTCAAATGGTTGATGACACTCTAGCTGTGTTCCACACTCATGCTGTGGCTGGCCTTCTAGGTGGCATTCTCACTGGCCTATTCGCTGAGCCACGTTTAAGTGCTCTCTTTCTACCCGTCACCAATTCCAAAGGAGGAGTCTATGGAGGCTCTGGTGGGGTCCAAATCCTTAAACAAATCGTGGGAGGTTTATTCATCATTGGATGGAACCTTGTGGCCACTTCAATCATTTGTCTTGTTATAAGTTTCATTGTTCCGTTGAGAATGACAGAGGAAGAGTTGTTGATTGGGGATGATGCAGTTCATGGGGAAGAAGCTTATGCATTGTGGGGTGATGGAGAGAAACTTAGCCTCTATAAAGATGATACTACCCACCATGGAATGGCATCAAGTGGTGCCACTCAAGTTGTCTGA 1458 0.4657 MASPPVNPLPVAYQAWTSLAVPDWLNKGDNAWQMVAATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQKFLIKQAGLPATPHYYHNGEVETAEIEPFYPMATMVWFQCVFAAIALIILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWCGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLTGAGLLWLGWAGFNGGDPYAANTDSSMAVLNTNVCAATSLLVWTWLDVIFFNKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGVLSGSVPWFTMMVLGKKLTLFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPRLSALFLPVTNSKGGVYGGSGGVQILKQIVGGLFIIGWNLVATSIICLVISFIVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTHHGMASSGATQVV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00730 485 FunFam Ammonium transporter 12 458 - -
Rops2g00730 485 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Rops2g00730 485 PANTHER AMMONIUM TRANSPORTER MEP2 17 464 IPR001905 GO:0008519|GO:0016020|GO:0072488
Rops2g00730 485 Gene3D Ammonium transporter AmtB like domains 12 473 IPR029020 -
Rops2g00730 485 SUPERFAMILY Ammonium transporter 24 437 - -
Rops2g00730 485 NCBIfam ammonium transporter 29 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Rops2g00730 485 Pfam Ammonium Transporter Family 31 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00730 Rops-Chr2 10319341 10323479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00730 137 474 Inorganic Solute Cotransporters AT2G38290 71.006 1.46e-167 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00730 K03320 - gmx:100785993 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00730 2 10319341 10323479 Rops2g00730 2 10319341 10323479 ECH