Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00707 ATGGGTAGAACTCCATGTTGTGAGAATGGGCACACAAACAAAGTTGTTTGGACTCTAGAGGAAGATGAACGCCTTGTCAACTACATCAAGGCTCACGGGAAAGGTTTGCTTCGTTGTGGAAAGAGTTGCAGGTTCAGATGGATAAATTATCTGAGACCTCATTTGAAGAGAGGAAACTTCACCGAAGAGGAAGATGAGCTCATCATAAACCTCCACAACACGCTTGGGAACAAATGGTCTCAGATAGCTTCCAGGTTACCTGGAAAGACTGACAATGCGATCAAGAATTATTGGAACACCCACATAAAGAGAAAACTATACAATTGTGGAATTGACCCGAAAACCCACCAACCACTGGATAAGGCCTCGAGTTCCTCCTCAGCTGTCACAGCAACTCCACCGACTAATACAACAGTGCCTATGGTCACAGAAAGCAATAAGAGAACTCACAACAACAATGCTAGTAGCAGCAACTACAACATCATCACTAATTTTCAGCTATTTGGTGCTTATGTTAGCAACACTATCACCAACACTGATTATCAGTCATTTGGTGTTGGTACCAGTTCCATGATCATTGGAACTAACTTGTTAGCTTGTGAAGAATCAAATGGCAACAGTGGGGTTACTAGAGAGGAAGCCCATCCTCAAGGACTCAACTTGGAACTTACCTTGGGCCCACCCTCTCAACACCAAGTCTCCAAGTTTTCTGGTGTTGTTACTGTTGTTACTCCACCTAGCTCGGTCAACGACTTGTATAGATCTTCAGGACCAAGAATATGA 783 0.4355 MGRTPCCENGHTNKVVWTLEEDERLVNYIKAHGKGLLRCGKSCRFRWINYLRPHLKRGNFTEEEDELIINLHNTLGNKWSQIASRLPGKTDNAIKNYWNTHIKRKLYNCGIDPKTHQPLDKASSSSSAVTATPPTNTTVPMVTESNKRTHNNNASSSNYNIITNFQLFGAYVSNTITNTDYQSFGVGTSSMIIGTNLLACEESNGNSGVTREEAHPQGLNLELTLGPPSQHQVSKFSGVVTVVTPPSSVNDLYRSSGPRI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00707 260 Gene3D - 16 56 - -
Rops2g00707 260 SMART sant 13 53 IPR001005 -
Rops2g00707 260 SMART sant 56 104 IPR001005 -
Rops2g00707 260 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Rops2g00707 260 CDD SANT 59 102 IPR001005 -
Rops2g00707 260 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 171 - -
Rops2g00707 260 Pfam Myb-like DNA-binding domain 15 51 IPR001005 -
Rops2g00707 260 Pfam Myb-like DNA-binding domain 57 101 IPR001005 -
Rops2g00707 260 Gene3D - 58 131 - -
Rops2g00707 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Rops2g00707 260 MobiDBLite consensus disorder prediction 118 156 - -
Rops2g00707 260 SUPERFAMILY Homeodomain-like 13 98 IPR009057 -
Rops2g00707 260 FunFam MYB transcription factor 58 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00707 Rops-Chr2 9946028 9947199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00707 1 139 MYB Transcription Factor Family AT4G38620 66.887 3.36e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Rops2g00707 Myb_DNA-binding 9.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00707 K09422 - gmx:778033 253.062