Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00701 ATGTGGTTCTCGGTTGCACAGCCACCAGAATGGCTCGACGGAACCATGATCGGTGACCATGGGTTCGACCCATTTGGGTTCGCGAAACCCGCAGAGTACTTGCAATTCGACCTTGACTCATTGGACCAGAACCTGGGGAAGAACGTCGCCGACGATGTGATCAGAACCAGGGTCGAGACCATTGAGGTAAAACCGACGCCGTTTCAGCCTTACAGTGAGGTTTTCGGGTTGCAGAGGTTCCATGAGTGTGAGCTTATTCATGGACGGTGGGCCATGTTGGGTCCTCTTGGTGCTTTAGCCGTTGAAGCTCTCACTGGTGTCGCATGGCAAGATGCCGGAAAGGGACCATTTTTATGTGTGTTTATTTAA 369 0.5203 MWFSVAQPPEWLDGTMIGDHGFDPFGFAKPAEYLQFDLDSLDQNLGKNVADDVIRTRVETIEVKPTPFQPYSEVFGLQRFHECELIHGRWAMLGPLGALAVEALTGVAWQDAGKGPFLCVFI* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00701 122 Gene3D Chlorophyll a/b binding protein domain 1 118 - -
Rops2g00701 122 SUPERFAMILY Chlorophyll a-b binding protein 2 113 - -
Rops2g00701 122 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 114 IPR001344 GO:0009765|GO:0016020
Rops2g00701 122 Pfam Chlorophyll A-B binding protein 8 112 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00701 Rops-Chr2 9866330 9866698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00701 1 114 Chloroplast and Mitochondria Gene Families AT2G40100 76.316 1.86e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00701 K08915 - gmx:100794604 213.001