Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00673 ATGGAAGAAGCGCAAGAGAAAGAAGAGGAGAATCTGTTCCCGATTTACTCTACTCGTTCCCAGCAAGACATGTCAGTTATGGTCTCTGCCCTTGTTCAAGTCATTGGTGGCACTCCAATGCATAAAGATTCAATAACAGCGTCTCAGTTCAGTGGTGCAGAGAATGAACAATCCCAAACACCGCAAGATCAAGGATGTGTGAACAAAGGAAACGTAAGAAGAGGCTATAGAGGAGTGAGGCACCGGCCATGGGGCAAGTGGGCCGCGGAGATTCGCGACCCAAAGAAGGCTGCAAGGGTTTGGCTTGGAACTTTTGACACTGCTGAGGCTGCTGCACTTGCTTATGATGAAGCAGCTCTCAGATTCAAAGGAAGCAAAGCTAAGCTTAATTTTCCAGAAAGGGTTCAAAGCATAGGAGAAGAATTTGGTTACCTCACAAATCGTCCACAATTCCAAGCAACGTCAAGAAGCAGTGGTGAAAATGAACAAGCACATACCCCAATTGCTCTTGCTACCCCTCCACACTTTTCGCTACAAACATATTCAAGTCCTTCTCAACATAACAACTTCAATAATGTTGTGCCTCGTGTCTGTGTGGGTGACGTGTTTGCTGCCTCTTCGTTTTCATCGTCATCTTCTGGACTATCTCATTCTCAACAACAACCTGAGCTTCTGACATCTTCGATGCAATTTGGAGGTTCTTCTTCTTCTGCTTCTGACCCACCTGGGAATTGGACAAGTGATTTGGATGGTAAACGTTGA 762 0.4567 MEEAQEKEEENLFPIYSTRSQQDMSVMVSALVQVIGGTPMHKDSITASQFSGAENEQSQTPQDQGCVNKGNVRRGYRGVRHRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGSKAKLNFPERVQSIGEEFGYLTNRPQFQATSRSSGENEQAHTPIALATPPHFSLQTYSSPSQHNNFNNVVPRVCVGDVFAASSFSSSSSGLSHSQQQPELLTSSMQFGGSSSSASDPPGNWTSDLDGKR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00673 253 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Rops2g00673 253 PANTHER DNA-BINDING DOMAIN 51 213 IPR044808 GO:0003700|GO:0009873
Rops2g00673 253 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Rops2g00673 253 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Rops2g00673 253 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Rops2g00673 253 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Rops2g00673 253 Gene3D AP2/ERF domain 75 134 IPR036955 GO:0003700|GO:0006355
Rops2g00673 253 MobiDBLite consensus disorder prediction 210 244 - -
Rops2g00673 253 FunFam Ethylene-responsive transcription factor 2 74 133 - -
Rops2g00673 253 CDD AP2 76 133 IPR001471 GO:0003700|GO:0006355
Rops2g00673 253 MobiDBLite consensus disorder prediction 210 253 - -
Rops2g00673 253 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00673 Rops-Chr2 9572279 9575792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00673 11 155 AP2-EREBP Transcription Factor Family AT5G61890 60.000 4.76e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops2g00673 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00673 - - gmx:100793410 208.379