Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00661 ATGTCACTGAGGAAAAGCACTAAGATTGATATTGCCACTGTTATAGAAGAGGAAATGCAGAATGCAAGGACGTCATTTGAGGAAGCCCATTTCAATTTGGTTGGTTCTCTTAATAACATTGAGGTGAAGAAAAGATTTGAGTTTTTAGAGGTTGTCACTGGAATTGTAGATGCTCATCTTCGATACTTTCAACAGGGATATAAGCTATTACATCAGATGGAACCTTTCATTAGCGAGGTTCTGGATTATGTACAACAGTCAAGAGAAAGATACAATAAGGAGCAGATTTCACTTTGTAAAAGGATGCAAGACTACAAAAAACAAGTTTATCAAGAAATTAAGTTTTCCTTGAATGGCCCTTATGGTTCTCCTAGTGGAGACTTTGTGCATCCTTTTTCTAGGATATCTAGTGAAGTACTAGATGTAGTAATGGAATCTGCTGCAAGTGGAAAGGTTCAAATCATTCGACAAGGGTATCTTTCAAAACGATCCTCTAATTTGAGAGGTGACTGGAAAAGACGGCACGGGAAAAGTTTGTCACTGAGGAAAAGCACTAAGATTGATATTGCCACTGTTATAGAAGAGGAAATGCAGAATGCAAGGACGTCATTTGAGAAAGCCCGTTTCAATTTGGTTGGTTCTCTTAATAACATTGAGGTGAAGAAAAGATTTGAGTTTTTAGAGGTTGTCACTGGAATTGTAGATGCTCATCTTCGATACTTTCAACAAGGATATAAGCTATTACATCAGATGGAACTTTTCATTAGCGAGGTTCTGGATTATGTACAACAGTCAAGAGAAAGATACAATAAGGAGCAGATTTCACTTTATAAAAGGATGCAAGACTACAAAAAACAAGTTTATCAAGAAATTAGGTTGTCCTTGAATGGCCCTTATGGTTCTCCTAGTGGAGACTTTGTGCATCCTTTTTCTAGGATATCTAGTGAAGTGCTAGATGTAGTAATGGAATCTGCTGCAAGTGGAAAGCCCCTTTCAGCTGACTCAGAAAACGGTGACTCTTACTCTGCCAATAGAAGTGATATGTTAGAAAGTTCTCCAGATGACGCTCCCACTGAGACAAAGAAGTCTATATCAAGAAATACCCTTAATAACCACTTACGTATGTCTAGGAGTTTGCAGTTGCATAAACACAGTATAAGAAATGAAAAACCCATTGATATTCTTAGAAGGGTGAGTGGGAATGATAAATGTGCCGATTGTGGTAAACCTGAACCCGATTGGGCATCCTTATATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGTGTACATATATCAAAAGTAA 1308 0.3769 MSLRKSTKIDIATVIEEEMQNARTSFEEAHFNLVGSLNNIEVKKRFEFLEVVTGIVDAHLRYFQQGYKLLHQMEPFISEVLDYVQQSRERYNKEQISLCKRMQDYKKQVYQEIKFSLNGPYGSPSGDFVHPFSRISSEVLDVVMESAASGKVQIIRQGYLSKRSSNLRGDWKRRHGKSLSLRKSTKIDIATVIEEEMQNARTSFEKARFNLVGSLNNIEVKKRFEFLEVVTGIVDAHLRYFQQGYKLLHQMELFISEVLDYVQQSRERYNKEQISLYKRMQDYKKQVYQEIRLSLNGPYGSPSGDFVHPFSRISSEVLDVVMESAASGKPLSADSENGDSYSANRSDMLESSPDDAPTETKKSISRNTLNNHLRMSRSLQLHKHSIRNEKPIDILRRVSGNDKCADCGKPEPDWASLYALNVLVFIVILVYIYQK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00661 435 SUPERFAMILY ArfGap/RecO-like zinc finger 388 417 IPR037278 -
Rops2g00661 435 SUPERFAMILY BAR/IMD domain-like 12 174 IPR027267 -
Rops2g00661 435 Gene3D Arf GTPase activating protein 378 429 IPR038508 -
Rops2g00661 435 Gene3D Arfaptin homology (AH) domain/BAR domain 173 289 IPR027267 -
Rops2g00661 435 Gene3D Arfaptin homology (AH) domain/BAR domain 1 111 IPR027267 -
Rops2g00661 435 PANTHER CENTAURIN/ARF 344 417 IPR045258 GO:0005096
Rops2g00661 435 SUPERFAMILY BAR/IMD domain-like 177 280 IPR027267 -
Rops2g00661 435 MobiDBLite consensus disorder prediction 328 369 - -
Rops2g00661 435 Pfam BAR domain of APPL family 14 94 IPR004148 GO:0005515|GO:0005737
Rops2g00661 435 Pfam BAR domain of APPL family 177 272 IPR004148 GO:0005515|GO:0005737
Rops2g00661 435 MobiDBLite consensus disorder prediction 330 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00661 Rops-Chr2 9401478 9412534 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00661 K12489 - nnu:104591852 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00661 2 9401478 9412534 Rops2g00661 2 9401478 9412534 ECH
Rops2g00661 2 9401478 9412534 Rops10g00864 10 19614949 19624036 PCT