Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00654 ATGAACTGGCCAACATGGAAAACCATGGCAATGACTGTGGTGTTGCTTCAGCTGAGTTTTCCCATGAAAATCTTCTGTCACTCTTCTCATGCAGATAGAATTGATCGACTACCTGGCCAACCCCACGTAGGCTTCCAACAGTTCTCAGGTTATGTTACAGTGGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAGTCAGAAACTGATCCAGCTACAAAGCCTCTTGTCCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTAGGAGTGGGTGCATTCTCTGAAAATGGACCTTTCAGACCCAATGGGAATGTTCTGATAAAAAATGAGCATAGTTGGAACAAAGTGGCAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCCTATGCTAAAGGTAGCTCCTCCTATATGACAGTGAATGATGAGATAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCCCAATACAGACACAGAGATTTGTTTCTAACAGGAGAAAGTTATGCAGGGCATTACGTTCCACAACTTGCAAAGCTCATGATTGAAATCAACAAAAAGGAGAAGATATTCAATGTGAAAGGCATAGCATTGGGTAATCCAGTTCTAGAGTATGCCACTGATTTCAATTCAAGGGCTGAATTCTTCTGGTCTCATGGATTAATATCAGATTCTACGTACAAAATGTTCACTACAGGCTGTAATTATTCCCGGTATGTCAGTGAATACTATAGAAACTCGGTTTCACCTCTATGTTCAAAGGTTATGGGCCAAGTAAGCAGAGAAACCAGTAAGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCCAAAGTCATTTGTCCTCGAACCCAACAAGCAAATGAGAGTATAGATGTATGTGTGGATGACAAAGTTACAAATTACCTAAACCGAAGAGATGTGCAGAAGGTGCTCCATGCCAAGGTTGTTGGAGTTCGAAAGTGGGATGTTTGCAGCAACATTCTGGACTATAAAATGCTCAACCTGGAAATACCTACTCTCCCTGTTGTTGGATTACTCCTAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGAAGCCGCACCTTGGTTCAAAAGCTGGCAAGACAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCTACCATAAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCAGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGACAGGCCTTTACCTGAAGTTTTCTGA 1398 0.4227 MNWPTWKTMAMTVVLLQLSFPMKIFCHSSHADRIDRLPGQPHVGFQQFSGYVTVDDMKHKALFYYFVESETDPATKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGNVLIKNEHSWNKVANMLYLETPVGVGFSYAKGSSSYMTVNDEITARDNLVFLQRWFNKFPQYRHRDLFLTGESYAGHYVPQLAKLMIEINKKEKIFNVKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTTGCNYSRYVSEYYRNSVSPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPRTQQANESIDVCVDDKVTNYLNRRDVQKVLHAKVVGVRKWDVCSNILDYKMLNLEIPTLPVVGLLLKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEDRPLPEVF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00654 465 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Rops2g00654 465 Gene3D alpha/beta hydrolase 28 290 IPR029058 -
Rops2g00654 465 Pfam Serine carboxypeptidase 39 457 IPR001563 GO:0004185|GO:0006508
Rops2g00654 465 SUPERFAMILY alpha/beta-Hydrolases 36 462 IPR029058 -
Rops2g00654 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Rops2g00654 465 Gene3D - 359 457 - -
Rops2g00654 465 FunFam Carboxypeptidase 359 458 - -
Rops2g00654 465 FunFam Carboxypeptidase 27 462 - -
Rops2g00654 465 Gene3D - 313 349 - -
Rops2g00654 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 445 IPR001563 GO:0004185|GO:0006508
Rops2g00654 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Rops2g00654 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Rops2g00654 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Rops2g00654 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00654 Rops-Chr2 9306343 9309319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00654 321 461 Calmodulin-binding Proteins AT2G22960 27.660 8.56e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00654 K16297 - gmx:100800002 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00654 2 9306343 9309319 Rops2g00654 2 9306343 9309319 ECH