Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00649 ATGGCTCCTTACGACCAATCTCGCCACTCTCTTGTCCCTGGATTCCTATACACATCAAAAACACTGTCCCATTTGGATACTTCGATCAACACCAATCATGGGTTGGCACCATCCACCACCACCACCTCCTCCATTGTATCACATTCATCACCATCACCACAAGGTAGTAGGACTATGAGTCCTATGATCCCTTCACCAAAGGAGGGTATCCAAATGTTCTCTACTGCTTACTATGCTGCATGCAGTGCTGGTGGAATCTTCAGCTGTGGCCTTACCCACATGGCTGTCACTCCTCTCGATCTTGTTAAGTGCAACATGCAGATTGACCCTGTGAAGTATAAGAACATCACATCAGGATTTGGAGTTTTATTGAAGGAGCAGGGTGCAAAAGGTTTCTTCAGGGGCTGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTATTACTCAGATCTTGCAGGACCAGAGAATGCAGCCAAGTACAAAACTCTCATATATCTAGCGGGTTCTGCTTCAGCAGAAGTTATTGCTGATATTGCACTTTGTCCCATGGAGGCAGTCAAAGTCCGTGTGCAAACTCAGCCTGGCTTTGCTCGAGGTTTGGCAGATGGGCTCCCCAAGTTTGTCAAGGCTGATGGTGCTGCTGGATTGTATAAAGGAATTGTCCCTCTTTGGGGTCGTCAGATTCCATATACAATGATGAAATTTGCTTCCTTTGAGACTATTGTGGAGATGATCTACAAATACGCCATCCCAGCCCCAAAAGAAAAGTGCAGCAAAAATTTGCAGCTTGGAGTCAGTTTTGCTGCAGGATATATAGCAGGTGTACTGTGTGCAATTGTCTCACACCCTGCAGACAATCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGCAGATTGGGTTAGTTGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGAGCTCAGTGGGGTCTCTATGATTCATTTAAAGTATTTGTAGGACTGCCAACTACTGGTGGAAGTGCTCCTGCACCCGCAAAATAG 1107 0.458 MAPYDQSRHSLVPGFLYTSKTLSHLDTSINTNHGLAPSTTTTSSIVSHSSPSPQGSRTMSPMIPSPKEGIQMFSTAYYAACSAGGIFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTLIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLADGLPKFVKADGAAGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPAPKEKCSKNLQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKQIGLVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPAK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00649 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 59 364 IPR044677 GO:0005315|GO:1990547
Rops2g00649 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 173 257 IPR018108 -
Rops2g00649 368 Gene3D Mitochondrial carrier domain 75 354 IPR023395 -
Rops2g00649 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 76 160 IPR018108 -
Rops2g00649 368 FunFam Phosphate carrier protein, mitochondrial 76 354 - -
Rops2g00649 368 Pfam Mitochondrial carrier protein 177 261 IPR018108 -
Rops2g00649 368 Pfam Mitochondrial carrier protein 79 162 IPR018108 -
Rops2g00649 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 353 IPR018108 -
Rops2g00649 368 MobiDBLite consensus disorder prediction 33 60 - -
Rops2g00649 368 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00649 Rops-Chr2 9274200 9276910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00649 5 367 Chloroplast and Mitochondria Gene Families AT5G14040 74.590 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00649 K15102 - gmx:100800530 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00649 2 9274200 9276910 Rops2g00649 2 9274200 9276910 ECH