Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00640 ATGGGTTGTGCGCTCGGAACTCCGGCGGGTGCCGGAGCTCGGAGCCTTCGCCGGCATAACTCTGCTGCTGAAGGAGGTAATAATGCGGTTAGGGTTCCCGAGAGGCAGAGAGCACCCCACGTCGGCGAAATTTCCGGTGTAATGCCGGCACCGGAGCTCCGGAAAACCAGACTCCCGGCTATCCAACAGGGTTGGCCGCCGTGGTTGATGGCCGTCGCCGGTGATGCAATCCGAGATTGGACTCCTCGCCGTGCCAACACGTTTGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTACAAAGCTAGGGACCTTGTTACTGGGAAGATAGTGGCTTTGAAGAAAGTTAGATTTGATAATTTGGAGGCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGAAGCTTGATCACCCCAATATTGTGAAGCTTGAGGGTTTGGTTACTTCAAGAATATCATCAAGTCTTTACTTGGTATTTGAGTACATGGAGCATGATCTTGCTGGCCTAGCAGCTGGCTTAGGTGTCAAATTCTCTGAGCCTCAGGTCAAATGCTATATGAAGCAATTACTGTCAGGCCTTGAGCATTGCCACAGCCGAGGTGTATTGCACCGAGATATCAAGTGTTCCAATCTGCTTATTGACAATGAAGGAATACTTAAAATTGCAGATTTTGGACTGGCAACTTTCTATGATTCTAAGCAAAAACGTCCCATGACTAGTAGAGTTGTGACCCTTTGGTATCGTCCCCCTGAGCTTCTTCTCGGGGCTACATTCTATGGTGTTGGTATTGATCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTTCTTGCTGGAAAGCCAATCATGCCCGGACGAACAGAGGTTGAGCAACTGCACAAAATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATACAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAACCATATAAAAGATGCATCTTAGAAACGTTCAAGGATTTTCCATCTTCTTCATTACCTCTAATTGAAACTCTTCTTGCAATAGATCCTGATGATCGTGGCACTGCCTCAACGGCTCTAAATAGTGAATTCTTTACCACTGAGCCCTGTGCTTGCGAACCATCGAGTTTGCCAAAGTATCCTCCCACCAAAGAATTAGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAGGCTCTAACTGGAAAAACTAATGTGGTTGATGGTGTCAGAAGAGTTAGAGTACGTGAGCGTGGTGGTGCCATTCCAGCTCCAGAAGCCAATGCAGAGATCCAATCAAACTTAGATAGGTGGAGAGCTGTGACTCATGCAAATGCAAAAAGTAAAAGTGAGAAATTTCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCAATGGATACATCAAATAAAGGAGCTGTTTCATTTGGAGCCACTGAAACTTCCTTTACCTCAACCATATCTGATTCAAAACCTTCTGGATCTGTTGGAAGTCATGCTGCCAGCTCTTCCAAAGGGAGGAAAACTAATAAAGCAAATTCCCAGATAACATCATCATGGAAATTTATGCGTGCATTCAAGCCATCAACAGTTGGCCTTTCATTTGATTTATTATTTAGAAGCAAATAA 1653 0.4513 MGCALGTPAGAGARSLRRHNSAAEGGNNAVRVPERQRAPHVGEISGVMPAPELRKTRLPAIQQGWPPWLMAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEAESVKFMAREILVLRKLDHPNIVKLEGLVTSRISSSLYLVFEYMEHDLAGLAAGLGVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKCSNLLIDNEGILKIADFGLATFYDSKQKRPMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCILETFKDFPSSSLPLIETLLAIDPDDRGTASTALNSEFFTTEPCACEPSSLPKYPPTKELDVKLRDEEARRQKALTGKTNVVDGVRRVRVRERGGAIPAPEANAEIQSNLDRWRAVTHANAKSKSEKFPPPHQDGAVGYPMDTSNKGAVSFGATETSFTSTISDSKPSGSVGSHAASSSKGRKTNKANSQITSSWKFMRAFKPSTVGLSFDLLFRSK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00640 550 PANTHER CELL DIVISION PROTEIN KINASE 86 376 - -
Rops2g00640 550 Pfam Protein kinase domain 88 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00640 550 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Rops2g00640 550 MobiDBLite consensus disorder prediction 1 38 - -
Rops2g00640 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Rops2g00640 550 ProSiteProfiles Protein kinase domain profile. 88 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00640 550 SMART serkin_6 88 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00640 550 MobiDBLite consensus disorder prediction 450 474 - -
Rops2g00640 550 Gene3D Transferase(Phosphotransferase) domain 1 171 412 - -
Rops2g00640 550 FunFam probable serine/threonine-protein kinase At1g54610 75 170 - -
Rops2g00640 550 CDD STKc_CDK9_like 88 372 - -
Rops2g00640 550 Gene3D Phosphorylase Kinase; domain 1 74 170 - -
Rops2g00640 550 MobiDBLite consensus disorder prediction 491 521 - -
Rops2g00640 550 FunFam probable serine/threonine-protein kinase At1g54610 171 412 - -
Rops2g00640 550 SUPERFAMILY Protein kinase-like (PK-like) 81 376 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00640 Rops-Chr2 9147614 9151624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00640 80 406 Core Cell Cycle Gene Families AT5G10270 51.020 8.04e-117 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops2g00640 Pkinase 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00640 K08819 - gmx:100789359 921.768