Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00623 ATGGCACATAATAAACTGGAAGTAAAGCTAGGAGAACCAACTCTGGTTCAGCCTGCTGAGGAAACAAAGAAAGGCCTCTACTTCCTTTCAAACCTTGACCAGAATATAGCATACCCAGTTCGCACACTTTACTGTTATAAGTCATCTTCCAGAGGCAATGAAGATGCTGCACAAGTCATCAAGGATTCCTTGTCAAAGATTCTTGTTCACTATTACCCTATGGCTGGCAGGTTGACAATAAGCTCAGAAGGGAAATTGATAGTCGATTGCACAGAGGAGGGTGTTGTATTTGTTGAGGCTAAAGCAAATTGTGTGATAGAGGATTTGGGAGATATGACAAAGCCTCACTTTGAAACTCTAGGAAAATTGGTTTATGATATCCCTGGTGCAAGGAACATACTAGAGATACCTCCTTTGCTAATTCAGGTGACAAAGTTCAAATGTGGAGGATTTGTTTTGGGGGTAAATGTGAACCATTGCATGAATGATGGTATAAGTGCCATGCAATTTGTGAACTCATGGGGTGAGACAGCTAGAGGCTTAGACTTTAAAATTCCACCATTTTTGGACAGAACCATACTCAAAGCACGCAACCCTCCTAAAATAGAGTTCCCACACCATGAATTTGCTGCAATTGAAGATTTATCAAACATCACCAAACTTTATGAGGAAGAGATTGTATACAGGTCTTTCTGTTTTGATCAAGACAAGCTTGAGGTGCTTAAGAAGAAGGCCATAGAAGATGGTGTTGTGAAGAAGTGTTCTACTTTTGAAGCACTCTCAGCTTTTGTGTGGACAGCTAGAACAGAAGCTTTAATGATGCATCCTGATCAACAAATGAAGCTACTTTTTGCTGTTGATGGAAGGTCTAGATTCGAGCCTCCAATACCAAAGGGATTCGTTGGCAATGCTATTGTGTTGTCAAATGCTATGTGCAAAGCAGATGAGTTGTTGAAGAACCCATTATCATTTACAGTGGGATTGATTGACAAGGCAATTGAGATGGTCACAGATAGTTACATGAGATCTGCTATTGACTATTTTGAAGTCAATAGAACCAAGCCTCCTTTAACAGCAACACTTTTGATCACAACATGGACTAGGTTGGCTTTCCACAATGCAGATTTTGGCTGGGGGAAGCCTCTGTCTTACGGTCCTGTAACCTTGCCAGAAAAGGAAGTCATTTTGTTCGTATCACATGGTGAAGAAAGAAAGGGCATAAATGTGCTTCTGGGTTTGCCTGCTTCTGCCATGAAAAAGTTTGAAGCCCTGATGAAGATATGA 1284 0.4089 MAHNKLEVKLGEPTLVQPAEETKKGLYFLSNLDQNIAYPVRTLYCYKSSSRGNEDAAQVIKDSLSKILVHYYPMAGRLTISSEGKLIVDCTEEGVVFVEAKANCVIEDLGDMTKPHFETLGKLVYDIPGARNILEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGISAMQFVNSWGETARGLDFKIPPFLDRTILKARNPPKIEFPHHEFAAIEDLSNITKLYEEEIVYRSFCFDQDKLEVLKKKAIEDGVVKKCSTFEALSAFVWTARTEALMMHPDQQMKLLFAVDGRSRFEPPIPKGFVGNAIVLSNAMCKADELLKNPLSFTVGLIDKAIEMVTDSYMRSAIDYFEVNRTKPPLTATLLITTWTRLAFHNADFGWGKPLSYGPVTLPEKEVILFVSHGEERKGINVLLGLPASAMKKFEALMKI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00623 427 Pfam Transferase family 8 423 - -
Rops2g00623 427 Gene3D - 216 426 IPR023213 -
Rops2g00623 427 Gene3D - 2 211 IPR023213 -
Rops2g00623 427 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 423 - -
Rops2g00623 427 FunFam Tryptamine hydroxycinnamoyl transferase 213 426 - -
Rops2g00623 427 FunFam Spermidine hydroxycinnamoyl transferase 6 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00623 Rops-Chr2 8870492 8871913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00623 6 425 Monolignol Biosynthesis Gene Families AT5G48930 35.862 2.07e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00623 K15400 - gmx:100527026 676.396