Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00621 ATGGCACATAATAAACTGGAAGTAAAGCTAGGAGAACCAACTCTGGTTCAGCCTGCTGAGGAAACAAAGAAAGGCCTCTACTTCCTTTCAAACCTTGACCAGAATATAGCATACCCAGTTCGCACACTTTACTGTTATAAGTCATCTTCCAGAGGCAATGAAGATGCTGCACAAGTCATCAAGGATTCCTTGTCAAAGATTCTTGTTCACTATTACCCTATGGCTGGCAGGTTGACAATAAGCTCAGAAGGGAAATTGATAGTCGATTGCACAGAGGAGGGTGTTGTATTTGTTGAGGCTAAAGCAAATTGTGTGATAGAGGATTTGGGAGATATGACAAAGCCTCACTTTGAAACTCTAGGAAAATTGGTTTATGATATCCCTGGTGCAAGGAACATACTAGAGATACCTCCTTTGCTAATTCAGGTGACAAAGTTCAAATGTGGAGGATTTGTTTTGGGGGTAAATGTGAACCATTGCATGAATGATGGTATAAGTGCCATGCAATTTGTGAACTCATGGGGTGAGACAGCTAGAGGCTTAGACTTTAAAATTCCACCATTTTTGGACAGAACCATACTCAAAGCACGCAACCCTCCTAAAATAGAGTTCCCACACTATGAATTTGCTGCAATTGAAGATTTATCAAACACCACCAAACTTTATGAGGAAGAGATTGTATACAGGTCTTTCTGTTTTGATCAAGACAAGCTTGAGGTGCTTAAGAAGAAGGCCATAGAAGATGGTGTTGTGAAGAAGTGTTCTACTTTTGAAGCACTCTCAGCTTTTGTGTGGACAGCTAGAACAGAAGCTTTAATGATGCATCCTGATCAACAAATGAAGCTACTTTTTGCTGTTGATGGAAGGTCTAGATTCGAGCCTCCAATACCAAAGGGATTCTTTGGCAATGCTATTGTGTTGTCAAATGCTATGTGCAAAGCAGATGAGTTGTTGAAGAAACCATTATCATTTACAGTGGGATTGATTGACAAGGCAATTGAGATGGTCACAGATAGTTACATGAGATCTGCTATTGACTATTTTGAAGTCAATAGAACCAAGCCTCCTTTAACAGCAACACTTTTGATCACAACATGGACTAGGTTGGCTTTCCACAATGCAGATTTTGGCTGGGGGAAGCCTTTGTCTTACGGTCCTGTAACCTTGCCAGAAAAGGAAGTCATTTTGTTCGTATCACATGGTGAAGAAAGAAAGGGCATAAATGTGCTTCTGGGTTTGCCTGCTTCTGCCATGAAAAAGTTTGAAGCCCTGATGAAGATATGA 1284 0.4065 MAHNKLEVKLGEPTLVQPAEETKKGLYFLSNLDQNIAYPVRTLYCYKSSSRGNEDAAQVIKDSLSKILVHYYPMAGRLTISSEGKLIVDCTEEGVVFVEAKANCVIEDLGDMTKPHFETLGKLVYDIPGARNILEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGISAMQFVNSWGETARGLDFKIPPFLDRTILKARNPPKIEFPHYEFAAIEDLSNTTKLYEEEIVYRSFCFDQDKLEVLKKKAIEDGVVKKCSTFEALSAFVWTARTEALMMHPDQQMKLLFAVDGRSRFEPPIPKGFFGNAIVLSNAMCKADELLKKPLSFTVGLIDKAIEMVTDSYMRSAIDYFEVNRTKPPLTATLLITTWTRLAFHNADFGWGKPLSYGPVTLPEKEVILFVSHGEERKGINVLLGLPASAMKKFEALMKI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00621 427 Gene3D - 212 426 IPR023213 -
Rops2g00621 427 Pfam Transferase family 8 423 - -
Rops2g00621 427 Gene3D - 2 211 IPR023213 -
Rops2g00621 427 FunFam Spermidine hydroxycinnamoyl transferase 6 209 - -
Rops2g00621 427 FunFam Tryptamine hydroxycinnamoyl transferase 213 426 - -
Rops2g00621 427 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00621 Rops-Chr2 8846681 8848102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00621 6 425 Monolignol Biosynthesis Gene Families AT5G48930 36.322 7.80e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00621 K15400 - gmx:100527026 673.315