Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00606 ATGGAGACACATCATGAAATACTATTCCCTATCTCATCTTCATCTGCTGCTTCTTCATCTGATTTTGAAGTTGTTCATAATTCTAATGCTCGTGATAGAAAGGCAGATCTTTTAAGAACTCAAAAGAAGGAGATAAACAAGAAAGGTAGCAAAAAAATCATGCAGCACAGATATGTATTTCAAACAAGGAGCCAGCTTGATATACTAGACGATGGGTACCGGTGGAGAAAGTATGGAGAAAAATCGGTGAAAAACAATAAATTCCCTAGGAGTTACTACAGATGCTCTTATAGAGGCTGCAATGTAAAGAAACAAATCCAACGCCATTCCAAAGACGAGCAGATGGTGGTAACAACCTATGAAGGGATTCATATTCACCCTGTCGAAAAGTCAGCTGAAAGCTTCGAACAAATCCTGAGAAACTTTCACCTATACAACCAACTGTATAATGTATCTCCAACGTTAGCATAG 471 0.3822 METHHEILFPISSSSAASSSDFEVVHNSNARDRKADLLRTQKKEINKKGSKKIMQHRYVFQTRSQLDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHSKDEQMVVTTYEGIHIHPVEKSAESFEQILRNFHLYNQLYNVSPTLA* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00606 156 FunFam WRKY transcription factor 57 55 129 - -
Rops2g00606 156 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 132 IPR044810 GO:0003700
Rops2g00606 156 Gene3D WRKY domain 56 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00606 156 SMART WRKY_cls 69 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00606 156 Pfam WRKY DNA -binding domain 70 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00606 156 SUPERFAMILY WRKY DNA-binding domain 61 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00606 156 ProSiteProfiles WRKY domain profile. 64 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00606 Rops-Chr2 8618336 8620074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00606 57 148 WRKY Transcription Factor Family AT5G13080 70.652 9.40e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g00606 WRKY 4.4e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00606 2 8618336 8620074 Rops2g00606 2 8618336 8620074 ECH