Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00591 ATGGGATCCTTACATGGCACTGAAGTCACTCCTACTACAAATGGTGGACTATTATTAACCCAATCCAAGTACATTAAAGACATCCTGACCAAAGCAAAAATGTTGGACTATAAGCCATATTCAAGTCCCATGACAACAAACTTGAAGCTTTCTGCTGTTGGTAGTCCTTCATTCTCAGATCTAAGTCTGTACAGATCAGTTGTAGGAAGTCTTCAATACATGACCATCACCATACCAGAATTGGCTTATTGTGTTAATCGGGGAAACCTTGAAGTTCTTCTTGTTAGTGCCAAGGGCCTTGAGAATACTGATTATCTTCGTAACATGGACCCTTATGTGATCTTCACATGCCGCACTCAGCAGCAACAAAGCAGTGTTGCATCAGATAAAGGAAGTAATCCAGAGTGGAATGAGAATTTTGTATTCAACGTATCTGAAGGCGTTTCGGAACTCAAATTGAAGATCATGGACAGTGATACCGGAACTGCTGATGATTTCGTAGGAGAAGCTACCATTCCACTAGATGCATTGTTTATTGAAGGAAGCATCCCATCCACGGCATACAACATTGTCAAAGATGGTCACTACTGTGGAGAGATTAGAATTGGTCTCACTTTTAATCGTGAGGATCGCAGAGAACTGCTAGAGGAAGATTTTGGTGGATGGAAGGAGTCTCGTTACTGA 684 0.4152 MGSLHGTEVTPTTNGGLLLTQSKYIKDILTKAKMLDYKPYSSPMTTNLKLSAVGSPSFSDLSLYRSVVGSLQYMTITIPELAYCVNRGNLEVLLVSAKGLENTDYLRNMDPYVIFTCRTQQQQSSVASDKGSNPEWNENFVFNVSEGVSELKLKIMDSDTGTADDFVGEATIPLDALFIEGSIPSTAYNIVKDGHYCGEIRIGLTFNREDRRELLEEDFGGWKESRY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00591 227 SMART C2_3c 89 186 IPR000008 -
Rops2g00591 227 Pfam C2 domain 88 178 IPR000008 -
Rops2g00591 227 ProSiteProfiles C2 domain profile. 70 187 IPR000008 -
Rops2g00591 227 Gene3D C2 domain 86 208 IPR035892 -
Rops2g00591 227 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 81 206 IPR035892 -
Rops2g00591 227 PANTHER C2 DOMAIN-CONTAINING 86 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00591 Rops-Chr2 8477114 8482494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00591 46 210 C2H2 Transcription Factor Family AT4G21160 29.341 1.67e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00591 - - gmx:100782974 221.861