Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00577 ATGAAGTTATGTACTTCATTGTTGTTTCTTGGTTTGGTTTCTATGCTCTCTTTTGTGGCTTCTGATAAGGTGGCTTCAAATGAAGTTTGGGCACTTACTACCTTCAAAGAAGCTGTCTATGAAGATCCACATAGGGTTTTGTCCAATTGGAATACTCTGGAATCAGATCCTTGTGACTGGAATGGAGTTTCATGCACTGGGACTCGAGATCATGTCATCAAGCTAAACATATCAGGGGCATTATTAAGGGGGTTTCTTGCTCCAGAATTTGGCCAAATCACCTATTTGCAAGAACTGATCTTGCATGGAAACAATCTCATTGGAATAATACCAAAAGAATTGAGCAAGTTAAAATCTCTTAAGGTGTTGGATTTGGGAAAGAATCAGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAATTGTAAAAATAAACCTAGAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAGCTAGGAAATTTGAAATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGAAGTTCAAATTTTGCTTCAAACATGCATGAGATGTATGCCTCAAATGTGAATTTAACTGGTTTGTGTCGTTCGTCTCAGCTAAAAGTTGCAGATTTTTCATATAACTTTCTTGTTGGGAGTATACCCAAATGCTTGGAGTATCTTCCAAGATCAAGCTTTCAAGGGAATTGCCTCCATATCAAAGACATAAAACAGCGGACTTCTATGCAATGTGCTGGTGCTTCAGCTGCCCAGGGCCATCCAGTAGTGAACTCAAAGCACCAACCTGCTGCTGAACATGTGTCCAAGCATCACGGAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTCTGATTGCTATTCTCACTGCTTTCCAGAGGTTTAACAACAGATCATCTATAATTATTCCTTGGAAAAAATCTGCAAGCGACAAAGAGCATATGGCAGTATATATAGACTCGGAGATGTTGAAGGATGTGATGAGGTATAGCAGACAAGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGTACCATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTGTGCATCAAGGAAGAGAATTGGACAGGTCATCTAGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCACGATAATGTAGGAAAGCTACTAGGCTATTGTAGGGAGAACACTCCATTTACAAGGATGCTGGTTTTTGAGTATGCATCAAATGGGACACTTTATGAGTACCTACATTGTTATGAAGAAGGGTGTCAGTTGTCTTGGACACGGCGTATGAAAGTTATCATAGGCATTGCGCGTGGACTCAAGTATTTGCATACCGAAGTTGAGCCACCATTCACTATCTCAGAGTTGAATTCCAATGCCGTATACCTTACAGAAGATTTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGTCAATTCTTGAAAGATCAGAAAAAAATTCTGGTTCCATTGGCAGTCAAGGTTCTGTTTGTCTTCTTCCAAACTCACTTGAGGCACGCCGTCTTGACACCAAAGGAAACATTTATGCTTTTGCAGTACTTCTACTGGAGATAATCAGTGGAAGACCACCATACTGCAAGGAGAAAGGGTACTTAGTGGATTGGGCCAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAGCATTTTAGCTATGATGACCTCAAAGTAATATGTGAGGTAATAGCTCTTTGTATCAGTCCTGATCCCACTGTCCGTTTATCCATGCGAGAATTATGCAGCATGCTGGAGAGCAAAATTGACACATCAATTAACGTGGATCTCAAGGCATCATCTTTGGCTTGGGCTGAACTAGCACTCTCATCATAA 1989 0.4163 MKLCTSLLFLGLVSMLSFVASDKVASNEVWALTTFKEAVYEDPHRVLSNWNTLESDPCDWNGVSCTGTRDHVIKLNISGALLRGFLAPEFGQITYLQELILHGNNLIGIIPKELSKLKSLKVLDLGKNQLSGPIPPEIGNLTQIVKINLESNGLTGRLPPELGNLKYLQELRLDRNKLQGPVPAGGSSNFASNMHEMYASNVNLTGLCRSSQLKVADFSYNFLVGSIPKCLEYLPRSSFQGNCLHIKDIKQRTSMQCAGASAAQGHPVVNSKHQPAAEHVSKHHGASKPAWLLALEIVTGTMVGSLFLIAILTAFQRFNNRSSIIIPWKKSASDKEHMAVYIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEENWTGHLELYFQREVADLARLNHDNVGKLLGYCRENTPFTRMLVFEYASNGTLYEYLHCYEEGCQLSWTRRMKVIIGIARGLKYLHTEVEPPFTISELNSNAVYLTEDFSPKLVDFESWKSILERSEKNSGSIGSQGSVCLLPNSLEARRLDTKGNIYAFAVLLLEIISGRPPYCKEKGYLVDWARDYLEMPEVMSYVVDPELKHFSYDDLKVICEVIALCISPDPTVRLSMRELCSMLESKIDTSINVDLKASSLAWAELALSS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00577 662 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
Rops2g00577 662 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Rops2g00577 662 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Rops2g00577 662 SUPERFAMILY L domain-like 27 235 - -
Rops2g00577 662 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Rops2g00577 662 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00577 662 Pfam Protein tyrosine and serine/threonine kinase 366 635 IPR001245 GO:0004672|GO:0006468
Rops2g00577 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Rops2g00577 662 PANTHER PROTEIN MALE DISCOVERER 2 15 660 - -
Rops2g00577 662 SUPERFAMILY Protein kinase-like (PK-like) 342 637 IPR011009 -
Rops2g00577 662 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Rops2g00577 662 Gene3D Ribonuclease Inhibitor 142 258 IPR032675 -
Rops2g00577 662 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00577 Rops-Chr2 8319848 8324811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00577 1 642 Receptor kinase-like Gene Family AT2G35620 29.205 9.77e-57 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops2g00577 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00577 - - gmx:100779744 1123.23