Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00566 ATGAGTAATAATTCGAGCAATTCGGGGAAGAAGCATCAAAGGGGATTGACCCAGCACTGCACAGATTCGTTGCTGAAGAAAAGGTTTGGGATGGGTTGTGAATTCTCTAAAGCATGCTGCTGGGGTACAGAACAAGGTGGTCCGGTTCCTGAGGCTCACGTTGATGAAAATGAAGACAACATTGAGGGTAATGACTTGCCGCGGTTTCGTGAGTACACAATTGATCAGCTTAGGAAGGCTACATCTGGATTTGCAGTAGAAAATATAGTTTCTGAGCATGGAGAGAAGGCTCCAAATGTTGTCTATAAAGGGAAACTTGAGAATCAAATGCGAATTGCTGTCAAACGGTTCAACAAATCAGCCTGGCCTGATGGCCATCAATTTTTGGAGGAGGCCAAAGCTGTTGGTCAGCTAAGGAACCAAAGATTAGCGAATCTGCTTGGATGTTGCTGCGAAGGTGATGAGAGGTTACTTGTATCAGAATATATGCCCAATGATACTTTGGCAAAGCACTTGTTCCATTGGGAAAATCAGCCCATGAAATGGGCTATCCGACTGAGAGTAGCCTTGCACCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCACTGTATCATGATCTTAATGCTTACAGAGTTCTTTTTGATGATGACTACAATCCTAAACTTTCATGCTTCGGTCTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACGAATCTGGCATTTACTCCACCTGAGTATCTAAGGACAGGTAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGGACCCTTTTGCTTGATCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCCCTAGACCTGATTAGGGACAGGAACCTTCAGATGCTTACAGACTCATGTTTAGAAGGACAATTTTCAGATGATGAGGGGACTGAATTAGTTCGTCTAGCCTCACGGTGCTTACAATCTGAACCACGCGAGCGTCCTAATCCAAAGTCATTGGTCGCTGCTCTTATGCCTCTACAGAAGGATTCCGAGGTTCCTTCTCATGTGCTGATGGGTATACCAGATGGTACTGCTGCTTTCCCCCTTTCTCCACTTGGGGAAGCTTGTCTACGAATGGATCTGACTTCCATACATGAGATGCTGGAGAAAATTGGGTATAAAGATGATGAGGGTGCGGCAACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCTAAGAAGAAGGGAGATGCTGCTTTTCGGCATAAGGACTTTAAAACTGCAATTGATAGCTATACGCAGTTCATTGACGTGGGAACCATGGTTTCTCCGACAGTTTATGCGCGTCGTAGTCTGTCTTATCTCATTAACAATATGCCAAATGAAGCACTCAATGATGCATTGCAAACTCAAGTAGTGTCTCCTGTTTGGTACATTGCATTTTATTTACAAGCTGTTGCTCTTTTAGCACAAGGCAAGGAGAATGAGGCTCAAGTGGCACTAAAGGAGGGTTCATCACTTGAAACTAAAAAGGGCACAAATTAG 1548 0.4399 MSNNSSNSGKKHQRGLTQHCTDSLLKKRFGMGCEFSKACCWGTEQGGPVPEAHVDENEDNIEGNDLPRFREYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNKSAWPDGHQFLEEAKAVGQLRNQRLANLLGCCCEGDERLLVSEYMPNDTLAKHLFHWENQPMKWAIRLRVALHLAQALEYCTSKGRALYHDLNAYRVLFDDDYNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPKSLVAALMPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTSIHEMLEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTQFIDVGTMVSPTVYARRSLSYLINNMPNEALNDALQTQVVSPVWYIAFYLQAVALLAQGKENEAQVALKEGSSLETKKGTN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00566 515 ProSiteProfiles Protein kinase domain profile. 87 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00566 515 Gene3D Tetratricopeptide repeat domain 408 514 IPR011990 GO:0005515
Rops2g00566 515 Gene3D Transferase(Phosphotransferase) domain 1 164 355 - -
Rops2g00566 515 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 51 512 IPR045845 GO:0004672|GO:0009742
Rops2g00566 515 FunFam probable serine/threonine-protein kinase At4g35230 59 162 - -
Rops2g00566 515 SUPERFAMILY Protein kinase-like (PK-like) 65 348 IPR011009 -
Rops2g00566 515 FunFam probable serine/threonine-protein kinase At5g41260 164 355 - -
Rops2g00566 515 FunFam probable serine/threonine-protein kinase At4g35230 408 515 - -
Rops2g00566 515 SUPERFAMILY TPR-like 414 508 IPR011990 GO:0005515
Rops2g00566 515 Pfam Protein tyrosine and serine/threonine kinase 100 337 IPR001245 GO:0004672|GO:0006468
Rops2g00566 515 Gene3D Phosphorylase Kinase; domain 1 58 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00566 Rops-Chr2 8245574 8256280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00566 49 363 Glycoside Hydrolase AT3G07070 32.070 3.16e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Rops2g00566 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00566 K14500 - gmx:100797107 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00566 2 8245574 8256280 Rops2g00566 2 8245574 8256280 ECH